Heterobasidion irregulare: HETIRDRAFT_434099
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Entry
HETIRDRAFT_434099 CDS
T03455
Name
(RefSeq) hypothetical protein
KO
K22756
E3 SUMO-protein ligase NSE2 [EC:2.3.2.-]
Organism
hir
Heterobasidion irregulare
Brite
KEGG Orthology (KO) [BR:
hir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hir04121
]
HETIRDRAFT_434099
03400 DNA repair and recombination proteins [BR:
hir03400
]
HETIRDRAFT_434099
Ubiquitin system [BR:
hir04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
HETIRDRAFT_434099
DNA repair and recombination proteins [BR:
hir03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
HETIRDRAFT_434099
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-Nse
zf-C3HC4_2
zf-RING_UBOX
DUF8246
U-box
PRP9_N
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
20674721
NCBI-ProteinID:
XP_009546182
JGI:
Hetan2_434099
UniProt:
W4K6W3
LinkDB
All DBs
Position
Unknown
AA seq
340 aa
AA seq
DB search
MPRKASRRAQSTPSDHIEEHTLSQQQDDDAVDEDGEDLPRRSSKVSKSKVKKATARQDED
DQPGPEDGNGGDMTPFDKETFGNQPLNKNEGSKLTGIAADWAMIEKNVRNSAPALLNDVA
SAVAELRDDEAAEKELIHLDKLMREMVDIDEEISAHKRTLEELHQQVIRGEEISDILDRY
ENDVKGKIDKYKKKTTRQKYGRNQHYADFRQAIHEVRNPDDAMPPVVEFLPREKDDVSDD
DDDDILVGGVMQDFKCPITLTFLVDPLTSTVCSHSFSGEAIRQMLGSNKATKKICPAAGC
RKMICYNDLKPDKALERKVKNAQRRARQREDDNDAEEIVE
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgtaaagcttcgcgccgcgctcaatccaccccatccgatcacattgaggagcac
accctctcccaacagcaagatgatgatgcagtcgacgaggatggagaagatctaccgcgt
cgcagttccaaggtttccaaatccaaagtgaagaaagccacggcacgccaagatgaggac
gatcagcctggccctgaagatggcaatggaggcgatatgactccgttcgacaaagaaaca
tttggcaatcaacccctgaataagaacgaaggctctaaactgacgggtatcgcggcggac
tgggcaatgatagagaaaaatgtcaggaacagcgcgccagcgcttctcaacgacgtagca
agcgccgtagctgagctgagggacgatgaagctgccgagaaggaactcatccatctcgat
aagttaatgcgagaaatggtcgacatagatgaggaaatctccgcgcataagaggacgctc
gaagagcttcaccaacaagtcatccgtggtgaagagatctcagatattctagatcgctat
gagaacgatgtgaaaggaaagatcgacaaatacaagaaaaagacaactcgtcagaagtac
ggcaggaatcaacattatgcagatttccgacaagccatacatgaggtacgaaatccggac
gatgcgatgccaccagttgtcgaatttttgcctcgagagaaagacgatgtcagtgacgac
gatgacgatgatattctcgtcggaggtgtcatgcaagatttcaagtgccctataacttta
acgttccttgttgatcccctcacctctacggtttgttcccactccttctctggagaggct
attcggcaaatgcttggctccaataaggccacgaagaaaatttgccctgcagccggttgc
agaaagatgatctgttataatgatttgaagccggacaaagctttggagcgcaaagtaaaa
aatgctcagcgcagagcgcggcagagggaagacgataatgatgcggaggagatagtggag
tga
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integrated database retrieval system
