Heterobasidion irregulare: HETIRDRAFT_434185
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Entry
HETIRDRAFT_434185 CDS
T03455
Name
(RefSeq) hypothetical protein
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
hir
Heterobasidion irregulare
Pathway
hir04120
Ubiquitin mediated proteolysis
hir04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
hir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
HETIRDRAFT_434185
04120 Ubiquitin mediated proteolysis
HETIRDRAFT_434185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hir04121
]
HETIRDRAFT_434185
Enzymes [BR:
hir01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
HETIRDRAFT_434185
Ubiquitin system [BR:
hir04121
]
Ubiquitin ligases (E3)
U-box type E3
HETIRDRAFT_434185
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
20674731
NCBI-ProteinID:
XP_009546324
JGI:
Hetan2_434185
UniProt:
W4K798
LinkDB
All DBs
Position
Unknown
AA seq
1103 aa
AA seq
DB search
MSQNESTNNPADDAERIRMKRLAKLQASTTQSSSPSPSPNPSTSSILPKSKPKPIPAPTP
KRAPEAPVTSSLVPPKKKAVSTPARFDYTAWENETITTVFKATLDRDLAIRSDYDIVWLK
NYDDEDQSMNVDGVDPPAMHADKLDNILIARLDIYPGSPEFDNEFRPFISRIPKDHTVFE
YLVGCWKRLNAAKSTLVKRGYSPVDVQRAFELEAKMRHLIISYIGIHLMNPEAFHCPEGK
PAGHLEFVAILLSLSSFSTPLYGGTVESPYSITPSEIEVFLQDLVNRFESEGDLELVLGP
VVRDLACHDSLSKSEGLASSDSQWRGVIAGLEALVSNKHIIHMIIRMPEWDPKEATPTDM
EDISLMGPLLSLNVFPRDWPSILKTYFSGMDSRPAVDVESARNSLRGTLKSLQSSLFKIF
NTIVRTSAECREAFLSYISHVVSLNVKRAGMQVDPNTVASDSFMMNLQIILLHFVEPFMD
ANFTKMDRINPLYLAHSTRINVKEETRINATSEEASQWENANQLSNSAPPPNFISEIFYL
TLAMNHYGFQKTIQTFDDYHKQIDEQQRHLNSIIGDRSWEGTAFQARMEAAIKQVKDNIA
QLNGMAAAASTQLLDPEVLFRANSFNSFVATWLVRFVDPRKKHPKPVVDLPLPTSVPLDF
RVLPEYIIEDCVEYYVFVVRHNAPSLELVGREELLVFSLTFLMSTWYIKNPFLKSKIIEI
LFFGCLKYYRNEQASLLGGTLNTHPLAVKYLMPALMHFYIEVEQTGASSQFYDKFNARRN
IAHLFKAVWDNPAHRTALKEEAKNVDKFVRFANLMINDVTYLMDESLSDLAQIYSIQVEM
KNTTEWAAKPVQYRREREGHLRSLERQATGYTQLGKSTVDLLKLFTAETKEPFMMPEIID
RLAAMLDYNLDTLVGPKSRELGVEDKEKYSFDPRQLLSDVVQVFLNLSEQDDFVQAVAGD
GRSYRKELFEKAASTCLKHSLKSPTDIERLRKFVVKVEEAKILIDAEDELGEIPDEFLDP
LMFTVMRDPVILPTSRAIIDRSTIKSHLLSDSKDPFNRAPLKIEDVIPNPELKERIQSYL
TERRNKNATFDKTEEDDVKMSID
NT seq
3312 nt
NT seq
+upstream
nt +downstream
nt
atgagccagaacgagtccacgaacaaccccgcggatgatgctgaacgtattcgtatgaag
aggctcgcaaagctccaggcttctacgacccagagcagcagccccagcccttctcctaac
ccctcgacttctagcatattacccaagtcgaaaccaaagcccattcctgcaccaacacca
aagagggctccagaggctcccgtcacgtcttcacttgtgccgccaaagaagaaagcggtg
tctacgcctgcgagattcgactacacggcctgggagaatgaaacaatcacgactgtgttc
aaggctacactcgatcgcgatctggccatacggagtgactatgatatcgtgtggctcaag
aattacgacgatgaagatcagtccatgaatgtcgatggtgttgatcctccagcaatgcac
gccgacaaactggataacattctcattgctcggcttgacatatacccaggatcacctgag
tttgacaatgaattccgacccttcatttcgcggataccgaaagatcacactgtgtttgaa
tacttggtcggatgctggaaacggctaaatgccgctaagtctacgctggtcaagagggga
tattctccagtggatgttcagagagcgtttgaattggaagcgaaaatgcggcatttgatc
atcagctacataggcatacatctcatgaaccccgaggcctttcattgtccagaagggaaa
ccagctggtcatctagagtttgtcgccatacttttatctctttcttctttctcgacgcct
ttgtatggaggaacagtcgaatcaccatacagcatcactccgtccgaaatcgaggtcttc
ctgcaagacttggtgaaccgcttcgaatctgaaggagacctggaacttgttttaggtccc
gtagtcagggatctcgcatgtcatgactccctttccaaatcggaaggccttgctagcagc
gactcacaatggcgcggcgtcatagccggattagaagcgttggtgtccaacaagcatatc
atacacatgatcatcaggatgccagaatgggaccccaaggaggccacccctactgatatg
gaggatatcagcttgatggggcctttgttgagcttgaacgtatttccacgggattggccg
tccatcctcaagacatatttctccgggatggactctcggcctgccgtcgatgtcgaatct
gctcggaatagtctgcgaggcaccttgaagagcttacaatcatctcttttcaagatcttc
aacaccatcgttagaacatctgcggaatgccgagaagctttcttatcttatatatctcat
gttgtatccttaaacgtaaaacgggctgggatgcaggtcgacccaaacactgtcgcctcc
gatagcttcatgatgaacttgcagattattttgttgcatttcgtggaacctttcatggat
gcaaatttcacgaaaatggatcgcatcaaccctctgtatcttgcgcattctacacgcatt
aacgtgaaagaggaaacccgcatcaatgctactagcgaagaggcatcgcagtgggagaat
gcaaatcaactctctaacagtgccccgcctccgaatttcatttctgagatcttttatttg
actctcgcaatgaaccactacggcttccagaagacgatacaaacctttgatgattaccac
aagcaaattgacgagcaacaacggcatcttaactctatcattggtgatcgatcttgggaa
ggaactgctttccaggcgcggatggaggcagctatcaagcaagtaaaggataatattgca
cagctaaatggaatggcagcggctgcatctacgcaattacttgaccctgaagtgctgttt
cgggcaaatagtttcaactcctttgtcgcaacctggctggtgaggttcgttgatcccagg
aagaagcaccccaaacctgttgtagacctgcccttgcctacatcggtcccattggatttc
agggtcctccccgagtatatcattgaagattgtgttgagtattatgtctttgtcgttcgt
cataacgcccccagcttagagttagtaggaagagaagagctcctagtatttagtctcacg
ttcttgatgtcgacctggtatatcaagaacccgttcttgaagtcgaagattatcgaaatc
ttgttcttcggttgtttaaaatattaccgaaacgagcaggctagccttctcggcgggaca
ctcaacacccatccattagctgtgaagtatctcatgccagctttgatgcatttttacatt
gaggttgaacaaactggcgcaagctctcaattttatgataaattcaacgcccgtcggaac
atagcccatctgttcaaggccgtttgggacaatcctgcacataggacggccctcaaagaa
gaggcaaagaatgtcgacaaatttgtccgctttgccaatcttatgatcaacgacgtgaca
tatctcatggacgaatccctgagcgatctggcacagatatacagcattcaagtagagatg
aaaaacaccacggaatgggcggccaagcctgtacaatatcgccgggagcgtgaaggtcat
cttcgaagtctggaacgccaggccactgggtatacgcagttgggcaagtccaccgtggat
cttttgaagttgttcacagcagagacgaaggaacccttcatgatgccggagatcattgac
cgcctcgctgcgatgctcgattataatcttgatactctcgtgggaccgaagtctcgtgag
ctgggtgttgaggacaaggaaaaatactcctttgaccctcgacagctgctgagcgacgtt
gtgcaagtatttttgaacctaagcgagcaggatgatttcgttcaggctgtggctggggat
ggtcgcagttataggaaggaactgttcgagaaggcggcttcgacttgtctcaagcactct
ctcaagagcccgacggacatcgagcgattgcggaaatttgtcgtcaaggtcgaagaggcc
aagattttgatagatgcagaggatgaacttggagagattcctgacgaattcctggacccc
ttgatgttcacagtgatgagggaccccgtcatccttcctacctcccgagccatcatcgac
agatccaccatcaagtcccatttattatcggactcaaaggatcctttcaatcgggcgccg
ttgaagatcgaggatgtgatacctaatcctgaattgaaggagcgaattcagtcctattta
acagagagaaggaataagaacgctactttcgacaaaacagaagaagacgatgtgaagatg
agcatagattag
DBGET
integrated database retrieval system