Heterobasidion irregulare: HETIRDRAFT_436847
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Entry
HETIRDRAFT_436847 CDS
T03455
Name
(RefSeq) hypothetical protein
KO
K08734
DNA mismatch repair protein MLH1
Organism
hir
Heterobasidion irregulare
Pathway
hir03430
Mismatch repair
hir03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
hir00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
HETIRDRAFT_436847
03460 Fanconi anemia pathway
HETIRDRAFT_436847
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hir03400
]
HETIRDRAFT_436847
DNA repair and recombination proteins [BR:
hir03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
HETIRDRAFT_436847
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
20674915
NCBI-ProteinID:
XP_009552158
JGI:
Hetan2_436847
UniProt:
W4JST1
LinkDB
All DBs
Position
Unknown
AA seq
772 aa
AA seq
DB search
MSTRPTGDDDEPQEPKPIRRLSEITINRIAAGEIIHRPASALKELIENSLDAGTTSIRVT
VKDGGLKLLQIQDNGCGIKKADLPILAQRFTTSKLSSFSDLARLATYGFRGEALASISHV
ANLSVITKTKADACAWRACYVDGELAPSKPGLSPDPKPFAGNDGTTITVENLFYNTTARL
SALRSSSEEYARILDVLTKYAVHNAGVSFVCKKAGSPTPDLSTPSSSTTHQAIRLLYGQT
IAKDLVQLRVSSSEKHGGGKGKGKRKADEMDQDEDEAAEGDGDGDGERSGGWTAEVHFTN
ANYHAKKMTFLLFINHRLVESSRIKRAMESIYSGVLPKGTSPFVYLNLQLDPTTVDVNVH
PTKREVHFLNEDVIVERVADGVQRKLAGLGERTFEYQTLLTGAFAKTDLGNKYRTAQDGD
GDDAMDEDDEEPSAAAPALKKKTLSQHKVRTSLADRTLDSMFHVASQLPGGAPRTGSTST
APSPKAKERHIPESVCYLRSIQELRKKVAGGAHKQLTEIMAKHVFVGVVDLQKELSLVQY
STKLYLVGHGALGEELFYQLGLRQFGNLPKFKLDPPPSLRALVELAVAVEEGTERSTLSK
PQIVDAITDTLVSRRDMLAEYFSFCISADGRVETLPLLLQDYVPNLDRLPLFLMRLGPQV
NWHSERECFDTFLRELAYFYVPGPVHPAVHADADAHTDADATGQAVSAHAHADANDADNA
AAAAAEKAEKWQIQHVLFAAARRYLVAPKTLLARDVVQVADLPDLYRVFERC
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacgcgtccgacgggcgacgatgacgagccgcaggagccgaagcccatccgtcgc
ctcagcgagataaccatcaaccgcatcgccgcgggcgagattatacacaggcccgcgtcg
gcgctcaaggagctcatcgagaacagcctcgacgcgggcacgacgtccatccgcgtcacc
gtcaaggacggcggcctgaagctgctgcagatccaggacaacgggtgcgggatcaagaaa
gcggacctgcccatcctcgcgcagcgcttcaccacgtccaagctctcctccttctccgac
ctcgcgcgcctcgcgacgtacggcttccgcggcgaggcgctcgcctccatctcgcacgtc
gcgaacctctcggtcatcaccaagacgaaggcagatgcctgtgcatggagggcgtgctat
gtcgacggcgagctcgcgccctccaagccggggctcagccccgacccaaaaccgttcgcc
ggcaacgacggcacgaccatcaccgtcgagaatctgttctacaatacgaccgcgcgcctg
tccgcgctgcggagctcgtccgaggagtacgcgcgcatcctcgacgtgctgaccaagtac
gccgtgcacaacgctggcgtgtccttcgtctgcaaaaaggcgggctcgccgacgcccgac
ttgtcgacgccctcgtcgtccacgacgcatcaggcaatccggctcctttacgggcagacg
atcgcgaaggacctggtgcagctgcgcgtttcctcgtccgagaagcacggcggcgggaaa
ggcaagggcaagaggaaggcggacgagatggaccaggacgaagacgaggccgcggagggc
gatggcgatggcgatggtgaacgcagcggcggatggacggcggaggtgcatttcacgaac
gcgaactaccacgcgaagaagatgacctttcttctcttcatcaatcatcggctggtcgag
tcttcgcggatcaagcgggcgatggaatccatctacagcggagtcctgcccaagggcaca
tcgccctttgtctacttaaacctccagctcgacccgaccaccgtcgacgtcaacgtgcac
cctacgaagcgcgaggtccactttctgaacgaagacgtgatcgtcgagcgcgtcgccgac
ggggtgcagcgcaagctcgcggggctgggagagcggacgttcgaataccagacgttgctc
acgggcgcgttcgccaagaccgatctcgggaacaaatacagaacggcgcaggatggcgat
ggcgacgacgccatggacgaagacgacgaagagccgtccgctgcggcgccggcactgaaa
aagaagacgctctcgcagcacaaggtcaggacctctttggcggaccggacgcttgactcc
atgttccacgtcgcatcccaactccccggcggcgctccccgcactgggtcaacgtccacc
gctccgtcaccgaaggcgaaggaaagacacatccccgagtcggtgtgctacctgcgcagc
atacaggagctgcggaaaaaagtggcgggcggggcgcacaaacagctcacggagataatg
gcgaagcatgtcttcgtcggcgtcgtcgatctgcagaaggagctcagcctcgtgcagtac
tccacgaagctgtacctcgtcggccacggtgcactgggagaggagctgttctatcagctt
gggctacgccagtttggaaacctgccgaagttcaagctcgacccgcccccgtcgctgcgt
gccctcgtcgagctcgccgtggcggtcgaagaagggaccgagcggagcaccctaagcaag
ccccagatcgtcgacgccatcacggacaccctcgtctcgcggcgcgacatgctcgccgag
tacttttctttttgcatctccgccgacgggcgcgtggagacgctgccgctcctgctgcag
gactacgtcccgaacctcgaccggctgcctctgttcttgatgcgcctcggaccccaggtg
aactggcactctgagcgggagtgcttcgacaccttcctccgcgagctcgcgtatttctac
gtcccgggcccagtacaccccgccgtgcacgccgacgccgacgcgcacacggatgcagat
gcgacagggcaggccgtatcggcgcacgcgcacgctgacgcaaatgacgccgacaacgcc
gctgccgccgccgccgagaaggcggagaagtggcagatccagcacgtcctgttcgccgcc
gcgcggcggtacctggtcgcgcccaagacgctgctcgcgcgcgacgtggtgcaggtcgcg
gatttgccggatctgtaccgggtgtttgagaggtgctag
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