Heterobasidion irregulare: HETIRDRAFT_437789
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Entry
HETIRDRAFT_437789 CDS
T03455
Name
(RefSeq) hypothetical protein
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
hir
Heterobasidion irregulare
Pathway
hir03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HETIRDRAFT_437789
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hir03019
]
HETIRDRAFT_437789
03012 Translation factors [BR:
hir03012
]
HETIRDRAFT_437789
Enzymes [BR:
hir01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
HETIRDRAFT_437789
Messenger RNA biogenesis [BR:
hir03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
HETIRDRAFT_437789
Translation factors [BR:
hir03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
HETIRDRAFT_437789
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
HA2_C
DEAD
HA2_N
OB_NTP_bind
STI1-HOP_DP
Motif
Other DBs
NCBI-GeneID:
20674982
NCBI-ProteinID:
XP_009541145
JGI:
Hetan2_437789
UniProt:
W4KP99
LinkDB
All DBs
Position
Unknown
AA seq
886 aa
AA seq
DB search
MAATGSGKTTQIPQLILDDYIDRGEGAKCNIICTQPRRLAAISVAERVAKERGEITGKGS
VGYQVRFEAKLPEDHGSITFCTTGIFLRRMQTALLEGGMSGGVNLDDVTHVVVDEVHERD
VDTDLLLVVLKRLLADRKARGKPIKVVLMSATIDPTLFQKYFPDDNGLPAGVIDIPGRSF
PVQKHYLNDFVQELAADPSTKAVFSDDSVSRYLQQELGDEYAALVGDRWRGNRDIDITKD
QDLELPYLFIALTITHIIKQSSDGHVLVFLPGWDEIQAVQRVLYERPLGLNIKDSSKFAL
HLLHSTIPLAEQQAIFEPPPAGVRRIILSTNIAETSVTIPDVVYVVDTGKIKEQRYDPQR
HMSSLVSAWVGTSNLNQRAGRAGRHRSGEYYGILGRKRVDALHTHQTVEMKRVDLTNVVM
HVKALEFPGMAVEDVLAATIEPPAAERVTAAMKDLQVVGAIDENQNLTSLGRVLLQLPVE
VQVGRLVLYGSFFRCLDQALTLAAILTNRDPFVSPMHLKVQAAAVKNSWSPDEFRSDTLA
ALCAYNAWWALQSNGEYVSANRFCSDNFLSKPTLLLIEKIKKHLLSALENVGVIDVSGGG
RVERFGGRRRDVVVPPELNTNGNSHPLLAALIAIATQPNFAIRTGEKTFRTQQDKMTFIH
PSSVNHRKRELPSAQGNHSEKMLIAFAEKRQNISAAGANSSTAQMSLVTTTRLDPMTYVL
FGAYRTSVTERGLECDDWLPVVGNIYALDDIQRLKTMMEGCMLRVFEGILMNKRRHSRTN
IPIAPREEEESGDEEDAAQSKDYSLSTNEVKELDYLTRDIVGILNRYADERVASQSRSNS
RPATPMGSPSFGSTLLPPRSGTSTPYGIRSAYSSRPSTPSRLGRSI
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atggccgctactggctctgggaagaccactcagattccacaactcatcctggatgattac
atcgacagaggggaaggggcgaaatgtaacatcatctgtacccagccccgccgtcttgct
gcgatcagtgttgctgaacgtgtagccaaagaacgcggagaaatcactgggaaggggtct
gttggataccaggtccggtttgaggcaaagctacctgaggatcatggttctatcactttc
tgcactacaggcatcttcttgagacggatgcagacggctttgcttgaaggcggaatgtca
ggcggtgtaaacctggatgatgtgacccatgtggtggtagacgaggtgcacgagcgggat
gtcgatacagacctcctactggtcgtccttaaacgcttgctggccgaccggaaggcgagg
ggaaaaccgatcaaagtggtgctcatgagcgctactattgaccccactcttttccagaaa
tatttcccagatgacaatgggcttccagcaggcgtaatcgacatacctggtcgctccttc
cctgttcaaaagcactaccttaacgattttgtgcaagaattggccgcggacccgagcacg
aaggcggtcttctccgacgactctgtgtccagatatctacagcaagagttgggcgatgaa
tatgcagctttagtaggtgatcgttggagaggaaaccgtgacattgacatcacgaaggat
caagacttggagctaccttatctgttcatcgccctgacgatcactcacatcataaagcag
tccagcgacgggcatgttcttgtgtttttgccaggatgggacgagattcaggctgtccaa
cgtgtcctttacgagcggcctctcgggctcaatatcaaagattctagtaaatttgctctc
cacctgctacactccacaatccctctcgctgaacaacaagcgatcttcgaacctccgccc
gcaggcgtccgccgtatcatactttccacgaacattgccgaaacatctgtgaccattccg
gacgttgtatatgttgtcgacacgggcaagattaaagagcagaggtatgatcctcagcgc
cacatgtcttctctcgtctccgcctgggttggtacgtcgaatctcaatcagcgcgcaggg
cgtgccggacgacaccggtctggagagtactacggcattttgggtcgcaagagagtcgat
gctctgcatactcatcaaactgtggagatgaagcgtgtcgacttgaccaatgtcgtcatg
catgtcaaggctctagagttccccggcatggctgtggaagatgttttggctgctaccata
gaaccgcctgccgctgaacgcgtaacggcggctatgaaggatctgcaggtcgtaggagct
atcgatgaaaaccagaatctaacatcactggggcgtgtactgcttcagcttccggtggag
gtgcaggttggtagattggtgctatacggtagtttcttccgttgcctcgatcaggccttg
accctcgcagcgatcttgacaaaccgtgacccattcgtctcgccaatgcacctcaaggtt
caagcggcggcggtgaaaaattcatggagcccggacgagttcaggtctgacactcttgcc
gccctgtgtgcatacaatgcttggtgggctctgcagagcaacggcgagtacgtgtccgct
aacaggttctgttcggacaacttcttgtccaagccgaccctgcttctcatcgagaagatc
aaaaaacatcttctaagcgctttagaaaatgtcggagtgatcgatgtttcaggaggcggg
cgtgtcgaacggtttggaggaagaagaagagacgttgtcgtccctccggagctgaacacg
aacggcaattctcaccctctgctcgcagcccttatcgctattgccacgcagcccaatttc
gccatcaggactggagagaaaactttccgcacccaacaggataagatgaccttcatccac
ccgtccagtgtaaatcaccgcaaacgcgagctcccttcagcacagggtaatcactccgaa
aaaatgctcatcgcatttgcggaaaaacgtcagaacatatctgcagccggcgcaaattcg
agcactgcccagatgtccctcgtcactacaacgagattggatccgatgacatatgtcctc
tttggggcttatcgtacttctgttaccgagcgagggctggagtgcgatgactggttgccc
gttgtaggcaatatctacgcgctggacgatatccagcgcctcaaaacgatgatggagggc
tgcatgttgcgggtattcgaaggcatcttgatgaacaaacgccgtcattcccgcacaaat
attcctattgcccctcgggaagaggaggaatccggggacgaggaagatgctgcgcagtcc
aaggactactcactctcgacaaacgaggtcaaggaacttgactatctaacaagagacatc
gtcgggatattgaatcgatacgccgacgaacgcgttgcgagtcagtcgaggagtaactca
agaccagctactccgatggggtcgccttcttttggttcgacgctacttcctccacgctcg
ggtacatctactccttacggtatacgatcagcctacagctcgagaccaagcacaccaagc
cggctggggagatcgatatag
DBGET
integrated database retrieval system
