Heterobasidion irregulare: HETIRDRAFT_437918
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Entry
HETIRDRAFT_437918 CDS
T03455
Name
(RefSeq) hypothetical protein
KO
K11096
small nuclear ribonucleoprotein D2
Organism
hir
Heterobasidion irregulare
Pathway
hir03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hir00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
HETIRDRAFT_437918
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hir03041
]
HETIRDRAFT_437918
03032 DNA replication proteins [BR:
hir03032
]
HETIRDRAFT_437918
Spliceosome [BR:
hir03041
]
Complex A
U1 snRNP components
Sm proteins
HETIRDRAFT_437918
U2 snRNP components
HETIRDRAFT_437918
Complex B
U1 snRNP components
HETIRDRAFT_437918
U4/U6.U5 tri-snRNP components
HETIRDRAFT_437918
Complex C
U2 snRNP components
HETIRDRAFT_437918
DNA replication proteins [BR:
hir03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
HETIRDRAFT_437918
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
20674996
NCBI-ProteinID:
XP_009541328
JGI:
Hetan2_437918
UniProt:
W4KQU6
LinkDB
All DBs
Position
Unknown
AA seq
111 aa
AA seq
DB search
MSQYVHIPKSELDEAQLRQLEEHEISQGPLSVLQQAVRNHTQVLISLRNNKKLLARVKAF
DRHSNMVLENVKEMWTEVPKGKNKKPVNKDRFISKLFLRGDSVILILRNQA
NT seq
336 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagtacgttcatataccgaagtccgagctcgatgaggcacagttgcgacagctg
gaggagcatgagatcagccaaggaccactgtcggtgctgcaacaagccgtcagaaaccac
acacaggtcttgatctccctccgaaacaacaagaagcttcttgcacgcgtcaaggctttt
gataggcacagtaacatggtccttgagaatgtcaaggagatgtggaccgaagttccaaaa
ggaaagaacaagaagcctgtgaacaaggatcggttcattagcaagttgttcctaagaggc
gattccgtaattttgattctgcgtaatcaggcgtga
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