KEGG   Heterobasidion irregulare: HETIRDRAFT_437918
Entry
HETIRDRAFT_437918 CDS       T03455                                 
Name
(RefSeq) hypothetical protein
  KO
K11096  small nuclear ribonucleoprotein D2
Organism
hir  Heterobasidion irregulare
Pathway
hir03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:hir00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    HETIRDRAFT_437918
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:hir03041]
    HETIRDRAFT_437918
   03032 DNA replication proteins [BR:hir03032]
    HETIRDRAFT_437918
Spliceosome [BR:hir03041]
 Complex A
  U1 snRNP components
   Sm proteins
    HETIRDRAFT_437918
  U2 snRNP components
    HETIRDRAFT_437918
 Complex B
  U1 snRNP components
    HETIRDRAFT_437918
  U4/U6.U5 tri-snRNP components
    HETIRDRAFT_437918
 Complex C
  U2 snRNP components
    HETIRDRAFT_437918
DNA replication proteins [BR:hir03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     HETIRDRAFT_437918
SSDB
Motif
Pfam: LSM Hfq
Other DBs
NCBI-GeneID: 20674996
NCBI-ProteinID: XP_009541328
JGI: Hetan2_437918
UniProt: W4KQU6
LinkDB
Position
Unknown
AA seq 111 aa
MSQYVHIPKSELDEAQLRQLEEHEISQGPLSVLQQAVRNHTQVLISLRNNKKLLARVKAF
DRHSNMVLENVKEMWTEVPKGKNKKPVNKDRFISKLFLRGDSVILILRNQA
NT seq 336 nt   +upstreamnt  +downstreamnt
atgagtcagtacgttcatataccgaagtccgagctcgatgaggcacagttgcgacagctg
gaggagcatgagatcagccaaggaccactgtcggtgctgcaacaagccgtcagaaaccac
acacaggtcttgatctccctccgaaacaacaagaagcttcttgcacgcgtcaaggctttt
gataggcacagtaacatggtccttgagaatgtcaaggagatgtggaccgaagttccaaaa
ggaaagaacaagaagcctgtgaacaaggatcggttcattagcaagttgttcctaagaggc
gattccgtaattttgattctgcgtaatcaggcgtga

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