Heterobasidion irregulare: HETIRDRAFT_441150
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Entry
HETIRDRAFT_441150 CDS
T03455
Name
(RefSeq) hypothetical protein
KO
K15174
RNA polymerase II-associated factor 1
Organism
hir
Heterobasidion irregulare
Pathway
hir04011
MAPK signaling pathway - yeast
Brite
KEGG Orthology (KO) [BR:
hir00001
]
09130 Environmental Information Processing
09132 Signal transduction
04011 MAPK signaling pathway - yeast
HETIRDRAFT_441150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hir03021
]
HETIRDRAFT_441150
Transcription machinery [BR:
hir03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
HETIRDRAFT_441150
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Paf1
Peptidase_M76
Motif
Other DBs
NCBI-GeneID:
20675332
NCBI-ProteinID:
XP_009549305
JGI:
Hetan2_441150
UniProt:
W4K1R1
LinkDB
All DBs
Position
Unknown
AA seq
438 aa
AA seq
DB search
MSFKKSKLDLLVRVRYQNPLPAPPCPPKLLDIPTNPIRYTRPEFLDALANDTPLPMIVDA
ECGMPLDLGKWEALWEDGADDSALNPDKNNLPLLDPKDQFLLSDPSSSGGFGNGEFSRTG
SGASTPLPAHVSWLRKTEYISREGSSSGPRATAMEIRSNHDTPDVSRDAQLRSVELSFAA
ANDNFDLAALRHPTKPHLTAESSYEILPDADIWANAYDLFRFSERPGDRPPDVEDPRLNC
AIMRPMESDGDHFLAYYLTKEDEAVEQFQNARRAAGIDVTENEDEATDFHFVRDYEVVKV
EQDVPNEFLLVFDEGNIKVEVQSTAGAATANGRARELRGRGAYYKNIERKMVLKKKRTEP
TERFRDKWALVRVAHTPPSREEAEERAEALAEVVDPLYLLQRDADADGEEDLGPSVSVPP
PAVENGMSGHSTAIKVDV
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgagcttcaagaaaagtaaactcgacctcctcgtccgcgtgcgctaccaaaaccccctc
cctgcacccccatgtcctccaaagctcctcgacatcccgacgaaccccatccgctacacg
cgccccgagtttctagatgccctcgcgaacgacacaccgctccccatgattgtcgacgcc
gagtgcgggatgccgcttgaccttggcaagtgggaagccctgtgggaggacggcgcagac
gactcagcactcaaccccgacaagaacaacctgccgctgctcgacccaaaggaccagttc
ctcctgagcgacccttccagctccggcgggttcgggaacggcgagttctcccgcacggga
tcgggcgcgtcgacgcctctccccgcacacgtctcctggctgcgcaaaacggaatacatc
agccgcgagggctcgtcgtccggcccccgcgcaacggcgatggaaatacgcagcaaccac
gacacgccggacgtctcccgggacgcgcagctgcgctccgtcgagctctccttcgcagcc
gccaacgataactttgacctcgcggcgctccggcacccgacgaagccccacctcaccgcc
gagtcctcgtacgagatcctccccgacgcggacatctgggcgaacgcgtacgatctgttc
aggttcagcgagcgccccggggaccgcccacccgacgtcgaggacccccgcctcaactgt
gcgatcatgcggccgatggagtctgacggggaccatttcctcgcgtactacctcaccaaa
gaagacgaggcggtcgagcagttccagaacgcgcgccgcgcggccggcatcgacgtcacc
gaaaacgaggacgaggcgaccgactttcacttcgtgcgggactacgaggtcgtcaaggtc
gaacaggacgtcccgaacgagttcttgctcgtgttcgacgagggcaacatcaaggttgag
gtgcagtccacggccggggccgcgaccgcgaacgggcgcgcgcgcgagctccgtgggcgg
ggcgcgtactacaagaacatcgaacgcaagatggtgctgaaaaagaagcggacggagccg
accgagcgcttccgcgacaagtgggcgctcgtgcgcgtcgcacacacgccgccgagccgc
gaggaggcggaggagcgcgcggaggcgctggcggaggtcgtcgacccgctgtacctcctg
caacgcgacgcggacgcggacggagaggaggatctcgggccctccgtttctgtgccgccg
ccggcggtggagaacgggatgagcggccacagcacggctatcaaggtggacgtgtga
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