Heterobasidion irregulare: HETIRDRAFT_443325
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Entry
HETIRDRAFT_443325 CDS
T03455
Name
(RefSeq) hypothetical protein
KO
K11786
ATP-dependent helicase STH1/SNF2 [EC:5.6.2.-]
Organism
hir
Heterobasidion irregulare
Brite
KEGG Orthology (KO) [BR:
hir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hir03021
]
HETIRDRAFT_443325
03036 Chromosome and associated proteins [BR:
hir03036
]
HETIRDRAFT_443325
Transcription machinery [BR:
hir03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SWI/SNF complex
HETIRDRAFT_443325
RSC complex
HETIRDRAFT_443325
Chromosome and associated proteins [BR:
hir03036
]
Eukaryotic type
Chromatin remodeling factors
RSC complex
HETIRDRAFT_443325
SWI/SNF complex
HETIRDRAFT_443325
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Bromodomain
Helicase_C
HSA
QLQ
SnAC
ResIII
DEAD
Motif
Other DBs
NCBI-GeneID:
20675517
NCBI-ProteinID:
XP_009541532
JGI:
Hetan2_443325
UniProt:
W4KQH9
LinkDB
All DBs
Position
Unknown
AA seq
1488 aa
AA seq
DB search
MAAPNIASFPQQQQHQLLQNPNNILLAQRNLYTKERFQNLTQRAIALKNQGFTPETNIEL
DKILKFLHQFQLYHASSRPHLDHSTTDHTPVVNGHAPSSLIPQNSMNGAAPSLTTGPLPQ
QPYPNPPSTPVSFTPDQINALRAQIHAFKLLQRGFPVPETIQQAIRSPNQVIPDLEKLLS
IQDPNAQIVDDAVKVQKGPGDVPPLPIPIPIPAPPETPLPGQDDVPPKLEDTQPEIVPVG
PIVDEDPDSSIYPYNAYLHPFTYIKRGNESTTDYASRLQRLLVPSIMPLGLDPYQLLSER
DRFVEARIQQRINELMAMPATMGDGDLEPVVDDDQFKENDQPSAGPSSHKAINLDLVHPP
STAHGKLRAMIELRSLRVLDKQRAMRASVAERLTHGSLLPLNRSDFRRTRKPTLRDSVTT
EKLERKQRSDREARAKEKHREQLNIITSHGREVLAANRAAQDRATRLGKSVLQFHIHAER
EEQKRIERISKERLKALKADDEEAYMKLIDTAKDTRITHLLKQTDSYLDSLAQAVMTQQS
EHADTGPAIPFESEEGPATEETFGAKKSLDDSQDDKGKIDYYAVAHKIKEKVTRQPSLLV
GGTLKDYQLKGLQWMVSLYNNKLNGILADEMGLGKTIQTISLIAFLIEVKKQRGPYLVIV
PLSTLTNWSGEFAKWAPAVRTISYKGNPAQRRLLQGDIRTGNFQVLLTTYEYIIKDRPHL
SKLKWVHMIIDEGHRMKNTQSKLSQTLSTFYHSRYRLILTGTPLQNNLPELWALLNFALP
KIFNSVKSFDEWFNTPFANSGTGDKIELNEEEALLIIRRLHKVLRPFLLRRLKQDVESEL
PDKVEKVVKVRMSALQTQLYKQMKKYKMIADGKDSKGKQSGVKGLSNELMQLRKICQHPF
LFESVEDKMNPAGLIDDKLIRSSGKIELLSRVLPKFFLRGHRVLIFFQMTRVMDIMEDFL
KMMGYKYLRLDGGTKTDERAGHVQAFNAKDSEIMVFILSTRAGGLGLNLQTADTVIIFDS
DWSVPCDRAHRIGQTKAVRILRLITEKSVEEAMYARARYKLDIDDKVIQAGRFDNKSTQE
EQEEFLRSILEADQEEENEEAGDMNDDEINSIIARTDEEEKFFSDLDIQRERELAMAWKA
AGNRGKPPQPLMQLEELPECYQTDEPFDVKEDLDEMEGRGHRRRAIVNYNDGLSDDQWAM
ALEEGEDVFELAERNREKKDRRATNKLLRDTESGAGTPMSDGRGRGRKGKAKAVEDFEPV
NGKRKRGIKSMSVTPSVQDDDDDDRDSKRRKTRVPELTPAVKEKMKKVFNECYKALLSCT
DENGRKRCELFRELPDKRDYPDYYRVIHSPIALSHMRKRISAHQYKTVTQFRDDARLMFS
NARTYNQEGSWVYIDAIEMERVFNNVFQRAVIGSGLPGADAVMPAPSPPGVAPGAPEAAG
AGAGAAAGGMDEALTPMDEDERPVLPKLKSGRKQIVSDDEYLTPSNDD
NT seq
4467 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgcccaacatcgcttcctttcctcaacaacaacaacatcagctcctccaaaac
ccaaacaacatcctcttggcccagcgcaacctctacacaaaggaacgcttccagaacctc
actcagcgtgcgatcgctctcaaaaaccagggcttcaccccggagacgaacatcgaactc
gacaagatcctcaagtttctccatcaatttcagctctaccatgcttcctcgagaccccat
ctggaccactctacgacggaccatactcccgtcgtcaacggccatgccccctcctccttg
atcccccagaacagcatgaatggtgctgctccctctctcaccactggcccgctcccgcaa
cagccctatcccaatcccccatccacccccgtctccttcaccccagaccagatcaacgcc
ctccgcgctcagatccacgcattcaagctgctccagcgtggctttccggtcccagagacg
atccagcaggccatccgctcccccaaccaggtcatcccagacctcgagaagctgctgtcc
atccaggaccccaatgctcagatcgtcgacgacgccgtcaaggtccaaaagggcccaggc
gacgtcccgccccttcccatccccatccccattcccgcccctccagaaacgcctcttcca
ggccaggacgatgtcccacccaaactggaggatacccagcccgagattgttcccgtgggt
cctatcgtcgatgaagatcctgactcgagcatatacccctacaacgcctacctccatccc
tttacctacatcaaacgcggcaacgagtccaccaccgactatgcgtcccgcctccagcgc
ctcctcgtcccctccatcatgcccttgggcctcgacccctaccagctcctctccgagcgc
gaccgtttcgttgaagcccgcatacagcagcggatcaacgagctcatggccatgcctgcg
accatgggcgacggcgacctcgagcccgtcgtggacgacgaccagttcaaggagaacgac
cagccctccgctggcccgtcttcgcacaaggcgatcaacctcgacctcgtccacccgccc
tccaccgcccacggcaagctgcgcgccatgatcgagctccgctcgctccgcgtcctcgac
aagcagcgcgccatgcgcgcgtccgttgcagagcgcctcacccacggctcgctgctgccg
ctcaaccgctcagatttccgccgcacgcgcaagccgacgctgcgcgactcggtcacgacg
gagaagctcgagcggaagcagcgctcggatcgcgaggctcgcgccaaggagaagcaccgt
gagcagctcaacatcatcacctcgcacgggcgcgaggtcctcgccgcgaaccgcgcggcc
caggaccgcgcgacgcgcctgggcaagagcgtgctgcaattccatatccacgccgagcgc
gaggagcagaagcgcatcgagcgcatctccaaggagcggttgaaggcgctcaaggcggac
gacgaggaggcgtacatgaagctcatcgacaccgccaaggacacgcgcatcacccacctc
ctcaagcagaccgactcgtaccttgactcgctcgcccaggcggtcatgacgcagcagagt
gagcacgccgacacgggccccgccattccgttcgagtccgaggagggcccagccaccgag
gagacgttcggcgcaaagaagtccctggacgactcgcaagacgataaggggaagatcgac
tattacgccgtcgctcacaagatcaaggagaaggtcactcggcagccgagcctgctcgtg
ggcggcacgctcaaggactaccagctcaagggtttgcagtggatggtcagcctgtacaac
aacaagctcaacggtatcctcgcagacgagatgggtctcggaaagacgatccagacgatc
tcgctcatcgccttcctcatcgaagttaagaagcagcgcggtccctacctggtgatcgtc
ccgttgtcgaccctcaccaactggtcgggcgagttcgccaagtgggcgccggcggtcagg
acgatctcgtacaagggcaacccggcgcagcgtcggttgctccagggtgacatcaggacg
ggcaacttccaggtgttgctgacgacctacgagtacatcatcaaggatcgaccccacctg
agcaagctcaagtgggtgcacatgatcatcgacgagggtcatcgtatgaagaacacccag
tccaagctctcgcagaccctgtccacgttctaccactcccgctatcgcctcatcctcacc
ggcaccccgctccagaacaacctccccgaactttgggcgctgctgaacttcgccctcccc
aagatcttcaactcggtcaagtcgttcgacgagtggttcaacacgccgttcgcgaactcc
ggcacgggcgacaagatcgagctgaacgaagaagaggcgctgctcatcatccgtcgcttg
cataaggtgctccgtcccttcctcttgcgccgtctcaagcaggacgtcgagtcggagttg
cccgacaaggtcgagaaagtcgtcaaggtgcggatgagcgcgctgcagacgcagctgtac
aagcagatgaagaagtacaagatgatcgccgacggaaaggacagcaagggcaagcaaagc
ggggtcaagggtctgagcaacgagctgatgcagctgcgaaagatatgccagcacccgttc
ctgttcgagagcgtcgaggacaagatgaaccccgccggcctcatcgacgacaagctgatc
cgctcctcgggcaagatcgagctgctgtctcgcgtcttgccaaagtttttcctacgcggc
cacagagtcctcattttcttccagatgacgcgggtgatggacatcatggaggacttcctc
aagatgatgggctacaagtaccttcgcctcgacggtggcaccaagacggacgagcgtgcg
gggcacgtgcaggcgttcaatgccaaggactcagagatcatggtcttcatcttgtccacg
agggctggcggtctcgggctgaacttgcagactgccgacaccgtgatcatcttcgactcc
gactggtcggtcccttgcgatcgtgcgcatcgtattggccagaccaaggccgtgcgcatc
ttgcgtctcatcacggagaagagcgtggaggaggccatgtatgcgcgcgcgcgctacaag
ctcgacatcgatgacaaggttatccaagccggtcgattcgacaacaaatcgacgcaggag
gagcaggaagagtttttgcgctcgattttggaggccgaccaggaagaagagaacgaggag
gcgggcgacatgaacgacgacgagatcaacagcatcatcgcgcgcacggacgaggaggag
aagttcttctccgatctcgacatccagcgggagcgcgagctggcgatggcgtggaaggcc
gcgggcaaccggggcaagccgcctcagccgctcatgcagctcgaagagctgccggagtgc
taccagaccgacgagccgttcgacgtcaaggaggacctggacgagatggagggccggggg
catcgtcggcgggccatcgtcaattacaacgacgggctcagcgacgatcagtgggcgatg
gctctggaggaaggcgaggacgtgttcgagctcgccgaacggaatcgggagaagaaggat
cggcgagcgacaaacaagctgctccgagacaccgagtccggggcgggcaccccgatgtcc
gacggtcgtggccgcgggcggaagggcaaggcgaaggcggttgaggactttgagcccgtc
aacggcaagcggaaacgggggatcaagtccatgtcggtgacgccatctgtgcaggacgac
gacgacgacgaccgggactcgaaacgccggaagacgcgggtacccgagttgacccccgcc
gtcaaagagaagatgaagaaggtgttcaacgagtgctacaaggcgctcttgtcgtgtacg
gacgagaacgggcgaaaacgctgcgagctgttcagagagctgccagataagagggactac
cccgactactaccgcgtgatccactcgccgatcgcgctctcgcacatgcgcaagcgcatc
agcgcgcaccagtacaagaccgtgacgcagttccgcgacgacgcgcggctgatgttcagc
aacgcgcggacgtacaaccaggagggctcctgggtgtacatcgacgcgatcgagatggag
cgcgtgttcaacaacgtcttccagcgcgccgtcatcggctctggcctccccggcgcggac
gccgtcatgcccgcgccctcgccgcccggggtagcgcccggggcgcccgaggcggcgggg
gcaggggcaggggcggcggcgggcgggatggacgaggcgctcacgccgatggatgaggac
gagcggccggtactacccaagctgaagagtgggcggaagcagatcgtcagcgacgacgag
tatctgacgccgagcaacgacgactag
DBGET
integrated database retrieval system