KEGG   Heterobasidion irregulare: HETIRDRAFT_450585
Entry
HETIRDRAFT_450585 CDS       T03455                                 
Name
(RefSeq) hypothetical protein
  KO
K14962  COMPASS component SWD2
Organism
hir  Heterobasidion irregulare
Pathway
hir03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:hir00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    HETIRDRAFT_450585
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hir03019]
    HETIRDRAFT_450585
   03036 Chromosome and associated proteins [BR:hir03036]
    HETIRDRAFT_450585
Messenger RNA biogenesis [BR:hir03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     HETIRDRAFT_450585
Chromosome and associated proteins [BR:hir03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     HETIRDRAFT_450585
    COMPASS/SET1 complex (yeast)
     HETIRDRAFT_450585
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz WD40_Prp19 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd WD40_MABP1-WDR62_2nd ANAPC4_WD40 WD40_MABP1-WDR62_1st Beta-prop_WDR35_TULP_N
Other DBs
NCBI-GeneID: 20676061
NCBI-ProteinID: XP_009545165
JGI: Hetan2_450585
UniProt: W4KAP1
LinkDB
Position
Unknown
AA seq 246 aa
MSSSMDHTVRLWDLRAPTCRGLLNLPAPSIVAYDSSGVVFAIAVNHYSRILLYDHANFDK
APFLTITLEDPTLSLVSYPPRAIYITSMAFSSSGKYLLIGCSGDAHYVMDAFEGHLLAKL
EGHVGLERRRLDAPQGIEPQRGCSGEEVSWTPDSNYVLGGSLDGRVCVWDLQNLQTKTGA
IDLKAPPLRLQPIAKMDGHPSPSRCLKFNPRLAMMCTAGAELAFWLPDQSADVDEVAKEL
LKKPPT
NT seq 741 nt   +upstreamnt  +downstreamnt
atgtcttcatctatggaccacaccgtgcgactgtgggacctccgagctccgacatgtcgc
ggtctgcttaaccttccggcaccctccatagttgcctatgacagtagtggtgtcgtcttc
gccattgctgtcaaccactactcccgtatccttctctacgatcacgccaactttgacaag
gcaccgtttcttaccattactctggaggatccgacgctttcgctcgtcagctatccgcca
cgcgccatctatatcacatctatggcgttctcaagcagcggcaagtaccttttgattggc
tgctctggagatgcgcactatgtgatggatgcgtttgagggtcacctgcttgcgaagcta
gaagggcatgtggggcttgaacggaggcgattagatgccccacagggcattgagccccaa
cgaggatgcagtggcgaggaggtgtcgtggacacctgatagcaactacgtattaggcggt
agcttggatggacgggtatgcgtttgggacttgcagaatttgcagacaaagaccggcgcc
attgatttgaaggcaccaccgttgcgattgcagcctatcgcaaagatggatggacatcct
agcccttctcggtgtctcaagttcaaccctcgactggcaatgatgtgtactgcgggtgcc
gaactagcgttttggctaccagaccagtctgcggatgtggacgaggtggcaaaggaattg
cttaaaaagcctcctacctga

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