Heterobasidion irregulare: HETIRDRAFT_450911
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Entry
HETIRDRAFT_450911 CDS
T03455
Name
(RefSeq) hypothetical protein
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
hir
Heterobasidion irregulare
Pathway
hir03013
Nucleocytoplasmic transport
hir03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hir00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
HETIRDRAFT_450911
03015 mRNA surveillance pathway
HETIRDRAFT_450911
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hir03019
]
HETIRDRAFT_450911
Enzymes [BR:
hir01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HETIRDRAFT_450911
Messenger RNA biogenesis [BR:
hir03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
HETIRDRAFT_450911
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_22
CMS1
Motif
Other DBs
NCBI-GeneID:
20676090
NCBI-ProteinID:
XP_009545564
JGI:
Hetan2_450911
UniProt:
W4KDB4
LinkDB
All DBs
Position
Unknown
AA seq
482 aa
AA seq
DB search
MEKDADGFYTPVVPADPAPPAEPAPAPPTEPPTPVPDPPADEAVSPDKIGSPSQSATDLI
KSTFEVHVTLADQQQDPNSPLFSAKTFEELGLHGDLLKGLFDMGFTKPSKIQERALPLLL
KNPPQNMIGQSQSGTGKTAAFVLTMLSRIDFSKDKPQALCLAPSRELARQIMSVIGTMGK
FTPVQTEYAIKDHLPRDATKVTAHIIVGTPGTMMDLIRRKVIDVSEVKVFVLDEADNMLN
EDGLGDKTLRIKNFLPRGGGTQIILFSATFPDHVRKYANNFAPNANKIELKRNELSVDSI
RQFYMDCKTEEQKYDILVLLYHILTIGQSIIFCEHRHTADRISQRMTAEGHKVASLHGAK
DGNERDAIIDGFRAGKEKVLITTNVIARGIDILQVNMVVNYDLPLLYDGGNRNTRQPDVE
TYIHRIGRTGRFGRKGISINFVHDKLTWGQMQQIEAATGKKIIRIETDDLDAMEEQMKKV
LK
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggatgcagatggattctatacacccgtagtacctgcagatccagctccccct
gctgagccggcgcccgcaccacccacggaaccacccacacccgtacctgaccctccagca
gatgaagctgtgtccccagacaagatcggtagcccttcacagtcggccaccgatctcatc
aagtctacatttgaagtccatgtcacgctagcggatcagcaacaagatccaaattcacca
cttttcagcgcaaagacgtttgaagagcttggactacatggagatctgctcaagggtctg
ttcgacatgggcttcaccaaaccgtccaagattcaagagcgcgcattgcctctccttctc
aaaaaccccccacagaacatgatcgggcagtctcagtcaggcacaggcaagacagccgcc
ttcgtgctcacgatgctctctcgcatcgatttctccaaagacaaaccacaagcgctctgc
cttgccccgtctcgagaactcgcgcggcagatcatgtccgtgatcggaaccatgggcaag
tttacgcctgtgcagaccgaatacgcgatcaaggaccaccttccgcgtgacgcgaccaag
gtcacggcgcacatcattgtgggcacgcctgggacgatgatggacctcatccgacgcaag
gtgatcgatgtgtcggaggtgaaggtgttcgtactggatgaggccgataacatgctgaac
gaagacgggctgggggacaaaacactgaggatcaagaacttccttccgcgaggaggagga
acgcagatcatcctgttctcggccacgttcccagaccacgtccgcaagtacgcgaacaac
tttgcgccaaacgcgaacaaaatcgagctcaagcgcaatgagctttcggtggactcgata
cggcagttctacatggactgcaagacggaggagcagaaatacgacatacttgtcttgctg
taccacatcctgacgattgggcagagcatcatcttctgcgagcaccgccacactgccgac
cgcatctcgcaacgcatgacggcggaggggcacaaggtcgcctcgctgcacggcgcgaaa
gacggaaacgaacgcgacgcgatcatcgacgggttccgcgcgggcaaggaaaaagtgctc
atcacgacgaacgtgatcgcgcgcgggatcgacatcctgcaggtcaacatggtcgtcaac
tacgacctgccgctgctctacgacggtgggaaccgcaacacgcgccagcccgatgtcgag
acgtacatccaccgcatcggtcggacgggccgattcggccgcaaaggcatctcgattaac
tttgtgcacgacaagttgacgtgggggcagatgcagcaaatagaggcagcgacggggaag
aaaatcattcggatcgagaccgacgatctcgacgcgatggaggagcaaatgaagaaggtg
ctcaagtaa
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integrated database retrieval system
