Heterobasidion irregulare: HETIRDRAFT_45139
Help
Entry
HETIRDRAFT_45139 CDS
T03455
Name
(RefSeq) hypothetical protein
KO
K06672
cohesin loading factor subunit SCC2
Organism
hir
Heterobasidion irregulare
Pathway
hir04111
Cell cycle - yeast
Brite
KEGG Orthology (KO) [BR:
hir00001
]
09140 Cellular Processes
09143 Cell growth and death
04111 Cell cycle - yeast
HETIRDRAFT_45139
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hir03036
]
HETIRDRAFT_45139
Chromosome and associated proteins [BR:
hir03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
HETIRDRAFT_45139
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
PDS5
HEAT
Adaptin_N
HEAT_EZ
Motif
Other DBs
NCBI-GeneID:
20676149
NCBI-ProteinID:
XP_009545800
JGI:
Hetan2_45139
UniProt:
W4K8D1
LinkDB
All DBs
Position
Unknown
AA seq
1654 aa
AA seq
DB search
MPALSRSRATPSSLHSQKSHVFKTPVAKGKLKRVFDEEDEPDLGGYGSPEEDFKPRKTSM
SDAMKSSPVKRTGDRDERGPLEKLTSLLEDIFEAEDTLPADADLESLSTEFFSLLTVEPA
RPQLHHNIIRKLTKYIGQVTRPMKRLRGHGGSVNTPRARGPGSIADIETSTLSRILKMLE
RSVRLGEDLDPFRSSEVEAPRGVSMSPSKRKNAKAKKALSQTERRSKSHTPVGGEDEQEE
TMKDADPPVHEITEADLDSLARALDVARDSILAADCCIALLGSDRLTKQVYSEELITVCL
SAIKNQLSKIIYPFVEAFTDGNLSGLLHYVVKAGSHDAKGYRRQLAEVFQAISSVLPRIN
NLVCADTVVMSDSIIIQAVYIAIGPFFVVESESEGKGRKDNVVVSTLGQSAMRGLRLDAL
SLIRSIFANHEDQRSWIIEEILGSLIRLSDTKQKAGQFRLRDGRSIRTVSALLLQLVQTS
AHGVRIEARRFGKARQQTLALRRQDSMVEKAEEPFLDDKDMGEIQLYISGLESAMKAAKT
IVIFLTQRSGKGKATKNSNESEYRAIFDNLVSDLLVVLFWPEWPAASLVLSIVCRFMVSS
LDDVKSTNQADNNAAKTIALDHLGVIAARLRSSSLKFKQIENGSDSPALRPLDEVLSNAN
MKQLERLIAAHQEVVTHLSKRSSEDQAYEASSARELTAVTWGQELAFALKQFNANLADDG
DDLDLIKSSQPKALRIGNKIKAALRDMWKDAATDVFDISSQDDVTHVDRLAEEIGIIQDL
KNSYHPILNVILLALDAPPVFMRTKALRALGQIVTSDPTILSTPNVRRGIESHLLDSSPA
VRDAAVELIGKYMIDSPEVAGNYFQKIADRIADTGLGVRKRVIKLLKSYYGVIDDSEHRT
DICTRLVMRMFDEDDTVKDLAVKTIEELWFQSPVSAMSLQRSQAAAAPINSADKTQLLAK
VSIIMGVSGHFKDRQSPLEDVLHKIMADKEGAEANALHVRYAEICEALIDGLVDASELPG
FTVINCIRTIYLFATAYPTVLSGSHASTLLPYLKNSSTPEEQVTSDYLLKIFRVSIPNMP
KTAAKFGQELQLALQPMILRPSTTGGVQALQETVACMCAVVQNLTHDFTRLVALLKSCNL
RLQQAIARSSTQSMAPTDARALSILIFIVSLLAEHCDFDHLRSGNQELAPDLDAISKGSI
IVHIYHSLLKLYHKHSEAGLRGRILQCLGFLFRSQPTLMTLDSSAVIMDAIFASPEDESR
GRLLKILQDFLVSEASKHAAKEKKSARPKSAATDVNMEELVGNTDGFADSGVSSAVVQRY
LDPILQAALSTHAQTQAAAVDILSFTIKQGLAHPLQSFPVIIALETSPNAALSGRASALH
AILHSKHASLLNSRYTISARSSFDYQKTLMQGHVQGYRVQNVPTALLQRWYSLVREKRAS
KLDFLKSLVRVFDMNTSLSSTQDDIDFARYMVENFATFDYKSQEEVLMVVKNLIAVLSTA
GMQLMESLSPSHLLTQLHEPVHPNPGDIEMSDAQVQPGDLIPPNGASNPSWQSLDKLPLL
RCSVVIAMIMLLKGHLKTLYGLSEEKCLKWVIGKKNAMGDKPANRRYNNLLSWDRIPFAT
APLLTTQDIASQRNTFLEIWNEDGVTVDPEDDMD
NT seq
4965 nt
NT seq
+upstream
nt +downstream
nt
atgccggctctctcgagatcgcgggccacgccgtcatctttgcattcccagaagagtcat
gtgttcaagacccctgtagccaagggtaagttgaagagggttttcgacgaggaggatgag
cccgacctgggtggctatggctcgccagaagaggactttaagccgaggaagaccagcatg
agcgatgccatgaaatcgtcgcctgtgaagaggaccggcgatcgcgatgaaaggggacct
ctggagaaactcacatctttgcttgaggatatcttcgaagctgaggacaccttgcccgct
gatgcggacctcgaatctctatccaccgagttcttttctctgctcaccgtggagcccgct
cgaccacagctacatcacaacataatccgcaaactcacaaaatacattggccaggtgacg
cgtccgatgaagcggctacgcgggcatggcggttccgttaacacgcctcgcgcgcgtggc
cctggcagtatagctgacattgaaacatcgacgctttcgcgcatattgaagatgctcgag
cgcagcgtacgcctcggcgaggacctcgatcctttccgtagcagcgaggtcgaggctccg
cgcggtgtgagcatgtcgccgagcaagaggaagaacgcaaaggcaaaaaaagcgctttcg
cagaccgagcggcgctcaaagtcgcatactccagtgggtggtgaggatgagcaggaagag
accatgaaggatgccgacccgccggtgcatgaaataaccgaagccgatctggacagcctt
gctcgggcactggatgttgcacgggacagtattctcgccgcagactgctgcatcgcgttg
ctcggaagcgatcgattgacgaagcaggtttattcggaggagctgatcactgtgtgtctc
tccgcgatcaaaaaccaactaagcaagatcatctatccgttcgttgaggcttttacagac
gggaatttatctggcctcctccactatgtcgtcaaagccggttctcacgatgccaagggc
tatcgacggcagcttgcggaggtattccaagcgatttcgtctgtgctgcctaggatcaac
aatctcgtgtgtgcggatacagtggtcatgtccgactcgatcatcatccaggcggtatat
atcgccatcggtccgttctttgtcgtcgagtcagaaagtgagggaaaggggagaaaggac
aatgtcgtcgtgagcacgttgggtcagagcgcgatgcgaggactgaggctagatgcgttg
tcgctcattcgaagtatctttgccaaccatgaagatcagcgctcgtggattatcgaggag
atcttagggtctttaatcagactctcagatacgaaacagaaggcagggcaatttcggttg
cgagatggtcgttcaatacgtaccgtctctgcactattactgcagttggttcagacttcg
gcgcatggtgtccggatagaggcacgtaggtttggcaaggcacgtcaacagacgcttgct
ctccgtcgtcaagacagcatggtcgaaaaggcagaagaaccgttcttggacgacaaggac
atgggggaaattcaactatacatctctggcctggagtcggcaatgaaggcagcaaagacg
attgtgattttcttgacgcaacggtcgggcaagggcaaggctaccaaaaactcgaacgag
tccgaataccgtgccatctttgataatttagtttcggatcttctagtagtcctcttttgg
ccagaatggccagctgcaagtttagtgttgagcatcgtctgcagattcatggtctcatct
ttggacgacgtgaaatctacaaatcaagccgataacaacgctgccaagacgatcgcactt
gatcacctcggcgtcatcgctgctcggctacgctccagttctctcaagttcaagcaaata
gaaaatggttctgattctccggccttgaggcccttggacgaggttctgtcaaatgcgaac
atgaaacaactggagcgacttattgcagctcaccaggaagtggtgacacatctctcaaaa
cgatcctccgaggatcaagcatacgaggcaagtagtgccagggagctcacggccgtcact
tggggtcaagaattggcttttgctctcaaacaattcaatgcaaacctggcagatgatggc
gatgacctcgatctcatcaagtctagtcaacccaaggcactccgtattggcaataagatc
aaggctgcattgagagacatgtggaaggacgccgctactgatgtattcgacataagctct
caggacgatgtgacgcatgtggatcgtctggctgaagaaataggaattattcaggatttg
aagaactcataccatccaatcttgaatgtcatcctgctcgctctggatgcaccgccagtt
ttcatgcgtacaaaagccttgagagcgctcggtcaaatcgttacgagtgatcctacaatt
ctatcgactcccaatgtccgccgtggaattgagagccatctgcttgacagctccccagct
gtgcgcgatgctgctgtcgagctcattggaaagtacatgatcgactcgcccgaagtagcg
ggcaactacttccagaagatcgcagatcgtatcgcagacaccggactgggagttcgcaag
cgcgtcataaaattactcaaatcttattacggcgtcatcgacgacagcgaacatcgtaca
gatatctgcaccagactggtgatgcggatgttcgacgaggatgataccgtcaaggatctg
gcagttaagacgatcgaagaactttggttccaaagccctgtttccgctatgtcattgcaa
cgatcgcaagctgctgctgctcccatcaattcggctgacaaaactcagctactggcgaag
gtttcgatcatcatgggtgtatcaggacatttcaaagatcgacagtcgcctctagaagat
gtgttgcacaagatcatggccgataaagaaggcgcggaggcgaatgcccttcatgtacgt
tatgctgaaatctgtgaggcattaatcgacggccttgtggatgcgtcagaacttccaggc
tttaccgtgatcaattgtatcaggactatctatctctttgcgacggcgtacccgactgtg
ctctcggggtcccatgcgtcaacattgttgccgtacttaaaaaactcttcaacgcctgaa
gagcaggtgacatcagactacctgcttaagatcttccgtgtctctattccgaacatgccg
aaaacagccgccaaattcggacaggaacttcagctggcattgcagccaatgattttgagg
ccttcgacgacgggcggggttcaggcattgcaagagactgtggcctgcatgtgtgccgta
gtccaaaacctgactcatgatttcacccgtctggtggctttgttgaaatcatgcaacctt
cgcctgcaacaagcgattgcacgttcctcgacccaatctatggcacctaccgacgcgcga
gccctctcgattctcattttcatcgtgtcccttttagcggagcactgtgacttcgaccac
ttaagaagcggaaatcaagaactggctcctgacttggacgctatatcaaaggggtccatc
atcgtccacatctatcacagtctactgaagctgtatcacaagcatagtgaggcaggtctg
cgaggacgcattcttcaatgccttggcttcctcttcaggtctcagcccaccttgatgact
ctggattcgtctgctgtgatcatggacgccattttcgcatcgccagaagatgagagtcgt
ggacggttactcaagatactgcaagatttcttggtatctgaggcgtcaaagcatgctgca
aaggaaaagaagagcgcaagaccaaagtcggctgccaccgatgtcaatatggaggaacta
gtcgggaataccgatggttttgctgactcaggggtgagctccgcggtggttcaaagatat
cttgatcccatattgcaagctgcactatcaacacacgcacagacccaagccgccgccgtg
gatatcttgagcttcactatcaaacaaggtcttgcacatcctctacagtccttccctgtg
attatagctctggagaccagtccaaatgctgcattgagtggaagagccagcgctttgcat
gccatattgcatagcaaacatgcatcactcctcaattctcgatacactataagtgctcga
tcttcttttgattaccagaagacactcatgcaaggtcatgtccaaggatatcgcgtacaa
aacgtcccgactgccttgcttcaacgctggtactcactcgttcgagagaagcgtgcctcg
aagctagattttctgaagtcactcgtgcgagtgtttgacatgaacacttctctatcgagc
actcaagatgacatcgacttcgctcggtatatggtggagaactttgccaccttcgactac
aagtctcaagaagaggtgcttatggtcgtgaaaaatcttattgccgtattatcgacggct
ggcatgcaattgatggagtcattatcaccgtcacatctactcactcagctgcatgagccc
gtacatccgaatcctggagacatagagatgtctgacgctcaggtccaaccgggggacctg
atcccgccaaacggagcctcaaatccttcgtggcaatcgcttgacaaattgccactgctc
cgttgctccgtcgttatcgctatgatcatgctcttgaagggtcatctcaagactttatat
ggtctctcagaagaaaaatgcttgaaatgggtcatcggcaagaagaatgcaatgggcgac
aagcctgctaacagacgttacaataatctgctctcgtgggaccgtatacctttcgcgaca
gcaccgctgctgaccacacaagatatagctagtcagcggaatacattcctcgaaatctgg
aatgaagatggtgtcacggttgaccctgaagatgacatggactaa
DBGET
integrated database retrieval system