Heterobasidion irregulare: HETIRDRAFT_454417
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Entry
HETIRDRAFT_454417 CDS
T03455
Name
(RefSeq) hypothetical protein
KO
K15175
parafibromin
Organism
hir
Heterobasidion irregulare
Brite
KEGG Orthology (KO) [BR:
hir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hir03021
]
HETIRDRAFT_454417
Transcription machinery [BR:
hir03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
HETIRDRAFT_454417
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CDC73_C
Motif
Other DBs
NCBI-GeneID:
20676508
NCBI-ProteinID:
XP_009550541
JGI:
Hetan2_454417
UniProt:
W4JTV3
LinkDB
All DBs
Position
Unknown
AA seq
460 aa
AA seq
DB search
MSSSTVTFPLLLLLVLLFVVVVVRVVEPRKYAGAGVGSKGFVCTTPRERLSPSHPSLTQL
CPHASLNLRPLALASTPCTPTTHFFRLRPLILSAPCTRVHSATTTPSTAPSRAPAAAAPA
LRPCAQRVAIVTLPVLQRIDGEALILPLPAQPCLSRAPAHTRKRLLTPHLFPCSLLGGEG
TTTLPGALPPDALFSKHAHSTLRTAAHASHERTPSSPSGYAHHHAAGAVESTTSPAKQRY
VADAHGLEIVKKIRQGEVELRDRTIVLCDIKANVDPARFAKRRAITDAKKPGKAPTAIPA
VSDANCSCAEKASVAFPAQSLPYRNGPDADLVHTETYYPIIMISSSPTILITMHKVKCFL
EDALYARPPSSFIRSYYVVDSVDALNKFGADAWDRVVAIALKGVYMSWTNDPSNPGVEDW
NVTEIKIDPNRGRIDKSTVAHSWKMPDMWTTQNKPSLMMA
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcgtcgaccgtaaccttccctcttctactcctcctcgtcctcctcttcgttgtc
gtggttgtccgcgtcgtcgagccgcgcaagtacgcaggcgctggcgtggggtcgaaggga
ttcgtgtgcacgacgccgagggaacgattgagtccttcgcacccgtctctaactcaactc
tgtccgcacgcaagcctcaaccttcgtcccctcgccctcgcctcgacaccatgcacaccc
accacccacttctttcgccttcgtcctctcatcctctcggccccatgcacacgcgtccac
tcggccacaacaaccccttcgaccgctccctcacgagcccctgccgccgccgcacccgcg
cttcgcccttgcgcacagcgtgtcgcaatcgtcacgctacccgtgcttcagcgcatcgac
ggcgaggccctaatcctgcccctccctgctcagccctgcctgtcccgcgcacctgcgcac
acccggaagcggctcctcacgccgcatctcttcccctgctccctcctaggaggcgagggc
acgaccacgctccccggtgccctaccgcccgacgccttgttctccaaacacgcccactcg
acgctgcgcaccgccgcacacgcatcgcacgagcgaaccccatcctccccctccggctac
gcgcaccaccatgcggctggcgctgtcgagagcaccacctcgcccgcgaagcagcgctac
gtcgcggacgcgcacggcctcgagatcgtcaagaagatccggcagggcgaggtcgagctg
cgcgatcgcaccatcgtcctgtgcgacatcaaagccaacgtcgatccagctcgctttgcg
aagcggagggccatcacggacgcgaagaagccaggcaaagcccccaccgcgatccccgct
gtctcagacgcaaattgctcgtgcgcagaaaaagcaagtgtcgctttccccgcgcagtct
ttgccatatagaaacggccccgacgctgacctcgtgcacacagaaacctactaccccatc
atcatgatatcttcctccccgaccatcctcatcaccatgcacaaggtcaagtgctttctc
gaagacgccctgtatgcccgccctccctcttccttcatacgcagttactacgtcgtggac
agcgtcgacgcgctgaacaagttcggcgcggatgcgtgggaccgtgtcgttgctattgca
ttgaagggcgtgtacatgtcgtggacgaacgatccgtctaaccccggggtcgaagactgg
aatgttaccgagatcaagattgaccccaatcggggacgcatcgacaagtcgaccgtggcg
cactcctggaagatgcccgacatgtggacaacgcagaacaagccgtcgctgatgatggcc
tga
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