Heterobasidion irregulare: HETIRDRAFT_457498
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Entry
HETIRDRAFT_457498 CDS
T03455
Name
(RefSeq) hypothetical protein
KO
K22817
non-structural maintenance of chromosomes element 1 [EC:
2.3.2.27
]
Organism
hir
Heterobasidion irregulare
Brite
KEGG Orthology (KO) [BR:
hir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hir04121
]
HETIRDRAFT_457498
03400 DNA repair and recombination proteins [BR:
hir03400
]
HETIRDRAFT_457498
Enzymes [BR:
hir01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
HETIRDRAFT_457498
Ubiquitin system [BR:
hir04121
]
Ubiquitin ligases (E3)
Atypical E3
HETIRDRAFT_457498
DNA repair and recombination proteins [BR:
hir03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
HETIRDRAFT_457498
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_Nse1
zf-RING-like
zf-RING_2
zf-C3HC4_2
zf-RING_5
zf-ANAPC11
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
20676841
NCBI-ProteinID:
XP_009542611
JGI:
Hetan2_457498
UniProt:
W4KJC9
LinkDB
All DBs
Position
Unknown
AA seq
252 aa
AA seq
DB search
MPSRDDAQKLFIQAVLSRRYLSKKLTELLVGRCIAAVRAADDTLNINDNYDAFIISVNNA
LDPLDLELAFLHDEITGRQMCALVNRKGDELAQIATDYSPLEIAYFKALVERIMLAPNES
YSVSSLAALRETAALKSSMTKTQAEIVLASFVAKGWLNKSPRGRYSLSTRTLLELQPYIR
STYADEVVECTVCFEIVTRGIGCFTANCKARLHDHCFANYRNSKHKCPACTADWSANEKR
LLFVGEKAASAD
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atgccctctcgcgacgacgcccaaaaactcttcatccaggccgtcctatcccgcagatac
ctctcgaaaaagctgacggaacttttggttggcagatgcatcgccgctgtccgagctgcg
gatgataccctgaacatcaacgacaactacgacgcgttcataatatcggtcaacaatgcg
ttggacccgctggacctggagctggcgttcctccacgacgagatcaccgggaggcaaatg
tgtgcactggtcaaccgcaagggcgacgagctcgcgcagatagcgaccgactactcgccg
ctcgaaatcgcgtacttcaaggccctcgtcgagcgcatcatgctcgcgccgaacgagtcg
tactccgtgtcgtcacttgcggcgctgcgcgagaccgcggcgctcaagtcgagcatgacg
aagacgcaggcggagatcgtgctcgcgagcttcgtcgcgaagggatggctgaacaaaagc
ccccgcggccggtactccctctcgacgcgcacgctgctcgagctccagccgtacatcaga
tcgacatacgcagacgaagtcgtcgaatgcaccgtctgcttcgagatcgtcacgcgcggc
atcggctgcttcaccgcgaactgcaaggcgcgcctgcacgaccactgcttcgcgaactac
cgcaacagcaagcacaagtgccccgcctgcaccgccgactggtccgcgaacgagaagagg
ctgctgttcgtcggggagaaggccgccagcgcggac
DBGET
integrated database retrieval system
