Heterobasidion irregulare: HETIRDRAFT_458198
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Entry
HETIRDRAFT_458198 CDS
T03455
Name
(RefSeq) hypothetical protein
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
hir
Heterobasidion irregulare
Pathway
hir03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HETIRDRAFT_458198
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hir03019
]
HETIRDRAFT_458198
Messenger RNA biogenesis [BR:
hir03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
HETIRDRAFT_458198
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
HETIRDRAFT_458198
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Cep57_MT_bd
Motif
Other DBs
NCBI-GeneID:
20676894
NCBI-ProteinID:
XP_009544122
JGI:
Hetan2_458198
UniProt:
W4KGL2
LinkDB
All DBs
Position
Unknown
AA seq
750 aa
AA seq
DB search
MAARKLQTEIDRTLKKVSEGVELFESIYDKMQASTNMTQKEKLETELKTQIKKLQRLRDQ
IKTWVASNDIKDKTALLENRRLIETQMEKFKACEKEMKTKAFSKGGLLQSAKLDPKAQEK
LEATQWLQTCVEELLLQVEGAEAEIETLQGGGRKKGKVGATAQERLEELEHLNERRKWHV
SRLEIMMRLLDNGSLTPERVNGLKDNIDYFVEANANDDYDEDEGMYDELNLDEEEEKFGL
VADERDSDDSDEASEADLPPRTPSKKHDEESVSSSKRDGSPIMKKASVALQLRKHSIVAE
APKPPPNPNFAQQPMASILKAGLPSTQPRPPAPQLPPIRYAAAAAAAVTPSTSTQNNAAV
ANPPSIQPLSVATESPVPNPSNVTITQETYNAVLSSPSLTHPSTTSPLLSSTSESVQQLD
GSTDSPALSEALSGMEASGTTSSRSRDASPRVGSQSPHVNQALSEAQQAPTQSQTNGVQP
TTQPAPQLSPLPQQVQQFPVGATAPTLAVELPHSSSSGSSPLPVPQQQQPQFPPGVKVTE
QQHQQSVPILNPQQSQMAGQRPPSAAPTQSMTPSLQQRSNVPNAFPGSLSDLVVSFENVK
QKAAHRMTNLDQVHKLLEGSYNTMPQPQDTEKPKYYVPRNPYQTPSYYPQATNPILSSQG
LFSQLDVETLFYVFYFLPGTYQQYLAAKELKRQSWRFHVKYLTWFQRHSEPQAITDEYEQ
GVYVYFDWEGSWCQRKKSDFRFEYRYLSED
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaagaaagctacaaacggaaatcgaccgaaccttgaagaaggtttcggagggc
gtcgagcttttcgagtcgatatacgacaagatgcaggcgtcgacaaacatgacgcaaaag
gagaagctggagacggaactgaaaactcaaatcaagaagctacagcgactccgagatcaa
atcaagacatgggtcgcgagcaatgacatcaaggacaagacagcattgcttgagaaccgg
aggttgatcgagacgcaaatggagaaattcaaggcatgcgaaaaggagatgaagaccaag
gcgttctccaagggcggccttttacaatccgccaagctcgacccgaaggcccaggagaag
cttgaagcgacgcagtggctacagacatgcgtagaagagcttctcttgcaggtggaggga
gcagaagcagagatcgaaacactacaggggggaggaaggaagaagggcaaggtcggggca
accgcacaggagagacttgaggaattggagcatctgaacgagcggcggaagtggcatgtc
agccggctggagattatgatgcggttactcgataatggctcccttacgccagaacgcgtg
aatgggttgaaagacaacatcgactatttcgtcgaggccaatgcgaacgatgactatgac
gaggacgagggcatgtacgacgagctcaatttggacgaagaggaagaaaaattcggcttg
gtcgcggacgagcgggatagtgacgactctgacgaggccagcgaagcggatctcccacct
cggacaccatcaaagaaacatgatgaagaaagcgtgtcaagtagtaaacgtgacggtagt
cccatcatgaagaaagcaagtgttgcattacaactacgcaagcattcaatagtggcagaa
gcaccaaaaccaccaccaaatccaaattttgcccagcagcccatggcgagcattctgaag
gcaggattaccgagtacacaaccgagaccaccagctccacaacttccgccaatacgatac
gcggcggcggcggcggcagcggttacaccttcaacaagcacacaaaacaatgcagctgtg
gcaaatcccccatcgatacagccgttgtcggtcgcaactgaaagtccagtacctaatcca
tcgaacgtgacaattacacaggaaacatacaatgccgtgctctcatcaccaagcttgact
cacccatctacgacaagccctttgctttcctcgacttctgaatctgtacaacaactcgat
ggttccactgattcacctgcactgtctgaagctttgtcgggtatggaggcatcaggaacg
acgtcatctcgttcacgcgacgcctcgccacgagtcggttcacagtcgcctcatgtcaat
caagcattatccgaagcgcaacaagcaccgacacaatcacagacgaatggtgttcaaccc
acgacacagcctgcaccacaactttcgccgcttccacaacaagtgcaacaattccctgtg
ggtgcaaccgcaccaaccctggcagtagaattgccgcattcctcatctagtggctcgtcg
ccactcccggtcccgcaacagcaacaaccacagttcccgcctggtgtgaaggttacagaa
cagcaacatcagcagagcgtaccaatactcaatcctcagcagtcacagatggcaggacag
cgacctccatcagcggcaccgacccagagcatgactccgtccttgcagcagaggtcaaat
gtgcccaatgccttcccaggatcactctccgatttagtcgtgtcatttgaaaacgtaaaa
cagaaagccgcgcatcgaatgacgaacctcgatcaggtgcacaaactgttggagggtagt
tacaacactatgccgcaaccacaggacacagagaagcctaagtactacgttccgcggaac
ccctatcaaacgccgtcgtattatccacaagcgacaaatcccattttgagctcacagggt
ctattctcgcaattagacgtcgagacactcttctatgtgttctacttccttcccggcacc
tatcaacagtatcttgcggccaaagagctcaagcgtcagtcatggcgattccatgtgaag
tatttgacatggttccagagacattctgagccgcaggcaatcacggatgagtacgaacag
ggtgtgtatgtttactttgattgggaaggtagctggtgtcagcggaagaagagcgatttc
cgatttgaatatcggtacttgtcggaggattga
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