KEGG   Heterobasidion irregulare: HETIRDRAFT_458198
Entry
HETIRDRAFT_458198 CDS       T03455                                 
Name
(RefSeq) hypothetical protein
  KO
K12580  CCR4-NOT transcription complex subunit 3
Organism
hir  Heterobasidion irregulare
Pathway
hir03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:hir00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    HETIRDRAFT_458198
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hir03019]
    HETIRDRAFT_458198
Messenger RNA biogenesis [BR:hir03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     HETIRDRAFT_458198
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     HETIRDRAFT_458198
SSDB
Motif
Pfam: Not3 NOT2_3_5_C Cep57_MT_bd
Other DBs
NCBI-GeneID: 20676894
NCBI-ProteinID: XP_009544122
JGI: Hetan2_458198
UniProt: W4KGL2
LinkDB
Position
Unknown
AA seq 750 aa
MAARKLQTEIDRTLKKVSEGVELFESIYDKMQASTNMTQKEKLETELKTQIKKLQRLRDQ
IKTWVASNDIKDKTALLENRRLIETQMEKFKACEKEMKTKAFSKGGLLQSAKLDPKAQEK
LEATQWLQTCVEELLLQVEGAEAEIETLQGGGRKKGKVGATAQERLEELEHLNERRKWHV
SRLEIMMRLLDNGSLTPERVNGLKDNIDYFVEANANDDYDEDEGMYDELNLDEEEEKFGL
VADERDSDDSDEASEADLPPRTPSKKHDEESVSSSKRDGSPIMKKASVALQLRKHSIVAE
APKPPPNPNFAQQPMASILKAGLPSTQPRPPAPQLPPIRYAAAAAAAVTPSTSTQNNAAV
ANPPSIQPLSVATESPVPNPSNVTITQETYNAVLSSPSLTHPSTTSPLLSSTSESVQQLD
GSTDSPALSEALSGMEASGTTSSRSRDASPRVGSQSPHVNQALSEAQQAPTQSQTNGVQP
TTQPAPQLSPLPQQVQQFPVGATAPTLAVELPHSSSSGSSPLPVPQQQQPQFPPGVKVTE
QQHQQSVPILNPQQSQMAGQRPPSAAPTQSMTPSLQQRSNVPNAFPGSLSDLVVSFENVK
QKAAHRMTNLDQVHKLLEGSYNTMPQPQDTEKPKYYVPRNPYQTPSYYPQATNPILSSQG
LFSQLDVETLFYVFYFLPGTYQQYLAAKELKRQSWRFHVKYLTWFQRHSEPQAITDEYEQ
GVYVYFDWEGSWCQRKKSDFRFEYRYLSED
NT seq 2253 nt   +upstreamnt  +downstreamnt
atggctgcaagaaagctacaaacggaaatcgaccgaaccttgaagaaggtttcggagggc
gtcgagcttttcgagtcgatatacgacaagatgcaggcgtcgacaaacatgacgcaaaag
gagaagctggagacggaactgaaaactcaaatcaagaagctacagcgactccgagatcaa
atcaagacatgggtcgcgagcaatgacatcaaggacaagacagcattgcttgagaaccgg
aggttgatcgagacgcaaatggagaaattcaaggcatgcgaaaaggagatgaagaccaag
gcgttctccaagggcggccttttacaatccgccaagctcgacccgaaggcccaggagaag
cttgaagcgacgcagtggctacagacatgcgtagaagagcttctcttgcaggtggaggga
gcagaagcagagatcgaaacactacaggggggaggaaggaagaagggcaaggtcggggca
accgcacaggagagacttgaggaattggagcatctgaacgagcggcggaagtggcatgtc
agccggctggagattatgatgcggttactcgataatggctcccttacgccagaacgcgtg
aatgggttgaaagacaacatcgactatttcgtcgaggccaatgcgaacgatgactatgac
gaggacgagggcatgtacgacgagctcaatttggacgaagaggaagaaaaattcggcttg
gtcgcggacgagcgggatagtgacgactctgacgaggccagcgaagcggatctcccacct
cggacaccatcaaagaaacatgatgaagaaagcgtgtcaagtagtaaacgtgacggtagt
cccatcatgaagaaagcaagtgttgcattacaactacgcaagcattcaatagtggcagaa
gcaccaaaaccaccaccaaatccaaattttgcccagcagcccatggcgagcattctgaag
gcaggattaccgagtacacaaccgagaccaccagctccacaacttccgccaatacgatac
gcggcggcggcggcggcagcggttacaccttcaacaagcacacaaaacaatgcagctgtg
gcaaatcccccatcgatacagccgttgtcggtcgcaactgaaagtccagtacctaatcca
tcgaacgtgacaattacacaggaaacatacaatgccgtgctctcatcaccaagcttgact
cacccatctacgacaagccctttgctttcctcgacttctgaatctgtacaacaactcgat
ggttccactgattcacctgcactgtctgaagctttgtcgggtatggaggcatcaggaacg
acgtcatctcgttcacgcgacgcctcgccacgagtcggttcacagtcgcctcatgtcaat
caagcattatccgaagcgcaacaagcaccgacacaatcacagacgaatggtgttcaaccc
acgacacagcctgcaccacaactttcgccgcttccacaacaagtgcaacaattccctgtg
ggtgcaaccgcaccaaccctggcagtagaattgccgcattcctcatctagtggctcgtcg
ccactcccggtcccgcaacagcaacaaccacagttcccgcctggtgtgaaggttacagaa
cagcaacatcagcagagcgtaccaatactcaatcctcagcagtcacagatggcaggacag
cgacctccatcagcggcaccgacccagagcatgactccgtccttgcagcagaggtcaaat
gtgcccaatgccttcccaggatcactctccgatttagtcgtgtcatttgaaaacgtaaaa
cagaaagccgcgcatcgaatgacgaacctcgatcaggtgcacaaactgttggagggtagt
tacaacactatgccgcaaccacaggacacagagaagcctaagtactacgttccgcggaac
ccctatcaaacgccgtcgtattatccacaagcgacaaatcccattttgagctcacagggt
ctattctcgcaattagacgtcgagacactcttctatgtgttctacttccttcccggcacc
tatcaacagtatcttgcggccaaagagctcaagcgtcagtcatggcgattccatgtgaag
tatttgacatggttccagagacattctgagccgcaggcaatcacggatgagtacgaacag
ggtgtgtatgtttactttgattgggaaggtagctggtgtcagcggaagaagagcgatttc
cgatttgaatatcggtacttgtcggaggattga

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