Heterobasidion irregulare: HETIRDRAFT_460242
Help
Entry
HETIRDRAFT_460242 CDS
T03455
Name
(RefSeq) hypothetical protein
KO
K20372
TBC1 domain family member 20
Organism
hir
Heterobasidion irregulare
Brite
KEGG Orthology (KO) [BR:
hir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hir04131
]
HETIRDRAFT_460242
Membrane trafficking [BR:
hir04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
HETIRDRAFT_460242
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RabGAP-TBC
CDC45
Motif
Other DBs
NCBI-GeneID:
20677058
NCBI-ProteinID:
XP_009549828
JGI:
Hetan2_460242
UniProt:
W4JY78
LinkDB
All DBs
Position
Unknown
AA seq
827 aa
AA seq
DB search
MVHSPSPPGPSPPSPSPSHPPLPDLPTADPIDWDALRRRSLAPGGFGSARAAIWLRLLHV
RDVDCALDCDGDRDGDGEAHPDERQIRLDTDRSFVLYPTGLPFLSSSSSSSSSSSSSSLL
TRRTRARRLPRRPRPAPTRPQRPRHRPLPPPPRPQLLPGPSSPRRRRRTRTRAPLTRASQ
GFHDIASVLLLTLPPRAQLPALARLSLHRLRDAMGRTLEPLLGLLRCAPVVPPSTRPAHS
TPPPPPPRAAPPDSVLMRLLRLADPTYAALLESVAPLPYASLSHLLTLFAHDAPSLACAQ
RIFDYLLARPPVAVVYLAAAPLPTPMRVREDAGRGAERYSGGAAASCCVLHSCISIRASR
PSLGDVTLARRAEVHELADAGEEGMVHAVLSGLPDFADDGDDDGDDGHDDDDGGGDDDDD
DDDDDDDGDDGGDGGDDGDGGGDGDDHAAQQDARDAPRAQDVTAGAHGTANGGDGDEREV
QGERAPGLASIPPPQPADPRDPADVPRDPADVPLPPSPPPTAPLRDQAARVQPLDPTRVP
LPPSPPPSRPCTPQLASPAPAPAPAPAPAHTPTPAPAPASAPHAPSRPPHAPKPTHSLRA
LLAHADALITLYPASHPALRLERTLGPASAVRTWREHALGGAGGDGDAEGGWDWAAADAD
AEAIVVRGADVVVPADESDEEGADDADDDAGEDEDEGEDGDWAEEEHEREKTSWFRLRRR
RTPRAPASADEKPAPGARGRAKKRLPRAHGPQYWRWRRRRDARQALVGASAVLVLGLAVA
VALYGCGYGGGRGCGGAGFGFGFGRGVGGVREGLESVVRLVGAFGGF
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atggtgcactcgccatcccctcccgggcccagcccgccctctccctccccgtcgcacccc
ccgctacccgacctccccacggcggaccccatcgattgggacgccctgcgccgccgcagc
ctcgccccaggcggcttcggcagcgccagagctgccatatggctccgcctcctgcacgtc
cgcgacgtcgactgcgccctcgactgcgacggcgaccgcgacggcgacggtgaggcgcac
ccagacgagcgccagatccgcctcgacacggaccgcagcttcgtcctctacccaacaggt
ctgcctttcctctcctcctcctcctcctcctcctcctcctcctcctcctcctccctactg
acccgccgcacgcgcgccagacgactcccccgcagaccacgcccagcgccaacacgccct
caacgccctcgtcaccgccctcttccgccgccaccccggcctcagctacttccaggtccg
tcctccccccgtcgccgccgccgcacacgcacacgcgccccgctcacccgcgccagccag
ggcttccacgacatcgcctccgtcctcctcctcaccctcccgccgcgcgcccagctcccc
gccctcgcccgcctcagcctacaccgcctccgcgacgccatgggccgcaccctcgagccc
ctcctcggcctcctccggtgcgcccccgtagtccctccttccacgcgccccgctcactct
acccccccccccccccccccccgggccgccccgcccgacagcgtcctcatgcgcctcctc
cgcctcgccgaccccacctacgccgccctcctcgaatccgtcgccccgctcccgtacgcc
tcgctctcccacctcctcaccctcttcgcgcacgacgcgccctccctcgcctgcgcccag
cgcatcttcgactacctcctcgcgcgcccgcccgtcgcggtcgtgtacctcgccgctgcg
ccgctcccgacaccgatgcgcgtgcgcgaggacgcgggacgcggagcagagcgctatagc
gggggcgccgcggcgtcttgttgcgtcttgcattcttgcatctccatccgtgcctctcgc
ccgagtttgggagatgtgacgctcgcgcgccgcgcggaggtgcacgagctcgcggatgcg
ggggaggagggcatggtgcacgccgtgttgagcgggttgccggattttgctgatgacggg
gatgatgacggggatgacggccatgatgacgatgacggtggcggtgacgacgacgacgat
gacgatgacgacgacgatgacggtgacgatggcggtgacggtggcgatgacggtgacggt
ggcggtgacggcgatgatcacgctgcgcagcaggacgcgcgggatgccccgcgcgcacag
gacgtcaccgcgggcgcgcacggtacggccaacggcggcgacggcgacgagcgagaagtg
cagggcgagcgcgcaccgggcctggcctctatcccgccgccgcagcccgccgacccgcgc
gacccagcagacgtcccgcgcgatccagcagacgtcccgctccccccctcgccgccgccg
actgcgcctctgcgagatcaggcggcgcgcgtgcagcccctcgacccgacgcgcgtgccc
ctcccgccgtccccgccgccttcgcgcccttgtacaccccagctcgcgtcacccgcaccc
gcacccgcacctgcacccgcacccgcacacacacccacgccggcgcccgcgcccgcatcg
gcaccccacgctcccagccgacccccgcacgccccgaaaccgacccactccctccgcgcg
ctgctcgcgcacgccgacgcgctcataacgctctaccccgcgtcgcaccccgcgctgcgc
ctcgagcgcaccctcgggcccgcgagcgccgtgcgcacgtggcgcgagcacgcgctcggg
ggcgcgggcggggacggggacgcagaggggggctgggactgggccgcggcggacgcggac
gcggaggctatcgtggtgcggggcgccgacgtcgtggtgcccgcggacgagtcggacgag
gagggggccgacgacgcggacgacgacgcaggcgaggacgaggacgagggcgaggacggc
gactgggcggaggaggagcacgagcgcgagaaaacgagctggttccgcctccgccgccgg
cgcacgccgcgcgcgcccgcctccgcggacgaaaaacccgcccccggggcgcgcgggcgc
gcgaagaagcggctgccgcgcgcgcacggcccgcagtactggcggtggcggcggcggcgc
gacgcgcggcaggcgctcgtgggcgcgagcgcggtgctcgtgctggggctcgcggtcgcg
gttgcgctgtatgggtgcgggtatggcggtgggcgcgggtgtggaggtgccgggtttggg
tttgggtttggtaggggtgttggtggggtccgggagggcctggagagtgtagtgaggctc
gttggtgcgtttggggggttctag
DBGET
integrated database retrieval system
