Heterobasidion irregulare: HETIRDRAFT_460605
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Entry
HETIRDRAFT_460605 CDS
T03455
Name
(RefSeq) ABC transporter
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
hir
Heterobasidion irregulare
Pathway
hir02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
hir00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
HETIRDRAFT_460605
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hir02000
]
HETIRDRAFT_460605
04147 Exosome [BR:
hir04147
]
HETIRDRAFT_460605
04090 CD molecules [BR:
hir04090
]
HETIRDRAFT_460605
Enzymes [BR:
hir01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
HETIRDRAFT_460605
Transporters [BR:
hir02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
HETIRDRAFT_460605
Exosome [BR:
hir04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
HETIRDRAFT_460605
CD molecules [BR:
hir04090
]
Proteins
HETIRDRAFT_460605
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_21
AAA_22
AAA_29
Zeta_toxin
RsgA_GTPase
AAA_18
AAA_16
AAA_28
AAA_15
AAA_5
AAA_25
Rad17
DUF2628
Motif
Other DBs
NCBI-GeneID:
20677093
NCBI-ProteinID:
XP_009550885
JGI:
Hetan2_460605
UniProt:
W4JV71
LinkDB
All DBs
Position
Unknown
AA seq
1315 aa
AA seq
DB search
MSTEEGFSEKAAPELAPARTPPKRGFFSHRRTNQDVIDEDRSEKTETAAPPAAAGVEKLT
PVSFLEMFRFSTRFEIFLDVVGLVAAAAAGAAQPLMSLMFGNLTQDFVSFGQAVASGDSA
SIPAAAAGFRNNASKDASYLVYIGVGLFVCTYVYMFVWVYTGEVNARRVREKYLQSILRQ
DIAFFDKTGAGEVATRIQTDTHLVQQGISEKVALVVNFLAAFVTGFVLAYIRNWRLALAM
TSVLPCIAITGTVMNKFVSKYMQLSLEHVAEGGSLAEEVFSTVRTAQAFGTQKILASLYD
VPIQKAFDVDAKAAVWHGGGLACFFFVIYSSYALAFSFGTTLINEGHANPGQVINVLMAI
LIGSFSLALMAPEMQAITHGRGAAAKLYHTIDRIPDIDSSSPEGMKPEKVLGEITLENVK
FNYPSRPDVPIVKDLSISFPAGKTAALVGASGSGKSTVISLVERFYDPLSGVVRLDGVNL
KDLNVKWLRSQIGLVSQEPTLFATTIKGNVAHGLINTPYEHASEEEKFKLIKEACVKANA
DGFISKLPLGYDTMVGERGFLLSGGQKQRIAIARAIVSDPKVLLLDEATSALDTQSEGVV
QNALDKAAAGRTTITIAHRLSTIKDADCIYVVGDGLILEKGKHNELLKDENGAYARLVAA
QKLRDTRDLEPKEIEDDITEGDAEEDIEKAAEEEIPLGRRNTQQSLASAILHERQQQKAA
LGEKSYSVSHLFMRMARINKDEWMKYVYGCIFAAMTGAVFPAFGIVWSKTINGFSLPDAQ
ERRHAGDRNALWLFIIAIISMFTIGFQNYFFAASAASLTQKLRSLSFRAVLRQDIEYFDK
EENSTGSLVSNLSDAPQKINGLAGITLGAIVQSLSTLVLGVILGLIFIWKVGLVGLACVP
LVVSTGYIRLRVVVLKDQSNKKAHEDSAQLACEAAASIRTVASLTREEDCLRLYSESLEE
PMQKSNRTAVWSNGLYSLSQSFSFFVIALVFWYGSRLVSFQEFTTVDFFIGLMSTVFGAI
QAGNVFSFVPDISSARGAAADIIHLLDSTPEVDAESTEGKIPQNVQGHIELENVHFRYPT
RPGVRVLRGLNITVKPGTYVALVGASGCGKSTVIQLLERFYDPLAGNVLLDGQNISEMNV
QEYRKNIALVSQEPTLYAGTVKFNILLGATKPTGEVTQKELEDACRNANILEFIESLPDG
FETEVGGKGSQLSGGQKQRIAIARALLRNPKVLLLDEATSALDSNSEKIVQAALDSAAKG
RTTIAIAHRLSTIQNADCIYFIKEGCVSEAGTHDELLALRGGYYEYVQLQALSKQ
NT seq
3948 nt
NT seq
+upstream
nt +downstream
nt
atgtccacagaggagggtttcagcgagaaggcggcgccggagttggccccagcccgcact
cccccgaagcgtggatttttctctcatagaaggacaaatcaagatgtcatcgacgaggac
agatcggagaagacggagactgcagcgccccctgctgccgccggagtagagaaattgact
ccagtctcgtttcttgagatgttccgattttctacaagattcgaaatatttcttgatgtt
gtggggctggtcgctgccgccgcggctggagcagctcagccactcatgagtttgatgttc
ggtaatcttactcaagacttcgtctcattcggtcaagcagtcgcgagcggcgattcagca
tccatccctgctgcagccgccggtttccgcaacaatgcgtccaaagacgcctcgtatttg
gtctatatcggtgtcggcctgttcgtttgcacgtacgtgtacatgtttgtctgggtctac
acgggcgaggtcaacgcaagacgtgtccgtgagaaatatctgcagtcgatcttgcgtcag
gatatcgcgttctttgacaagactggtgcaggggaggtggctacccgcattcagacagat
acccatttggtccaacaaggcatttcagagaaggtggctctagttgtgaacttcttagcc
gctttcgtcactggttttgttttggcttacatccgaaattggcgcctggccctcgcgatg
acgtcggttttgccctgcattgcgatcacggggaccgtcatgaacaaatttgtctccaag
tatatgcagctttctctcgagcatgtcgctgaaggcggatcgctcgcggaagaggtgttt
tctacggtccgtactgctcaggcgtttggcacgcagaagattctagcgtctctgtatgat
gtgcctattcaaaaggccttcgatgttgatgccaaagcagctgtctggcacggaggaggg
cttgcctgctttttctttgtgatatattcgtcttatgcacttgccttttcctttggtacc
acactcatcaatgagggtcatgccaatcctggacaagtcattaacgtgttgatggccatc
ctcatcggctcgttctccttggccctcatggctcctgaaatgcaagcgatcacacacgga
cgcggagcagccgctaagctctatcacacgatcgaccgtatacccgatatcgattcgtcg
agcccagaaggcatgaaacctgaaaaggtgttgggtgaaatcactctcgagaatgtcaag
ttcaactacccttcgcgcccagacgtgcccatcgtcaaagacctctcgatttctttcccg
gctggtaagactgctgcgcttgtcggcgcgtccggctctggaaagtccacggtcatctcg
ctcgtcgagcggttctatgacccgctatcaggcgtcgtgagactcgatggcgtcaacctc
aaggacctcaacgtcaagtggttgcgctcgcaaatcggtcttgtttctcaggaaccgacg
ctatttgcgacgacgatcaaggggaatgtcgcgcatgggctgatcaacacgccgtacgaa
cacgcatccgaagaggaaaaattcaagttgatcaaggaagcatgcgtcaaggccaacgct
gacgggttcatttcgaagctgccgttgggttatgataccatggtcggcgagcgcggtttc
ttgctctccggtggtcagaagcaacggattgcgattgctagagctatcgtttcagaccca
aaggtcttgctgttggatgaagccacttcggcgctggacacgcagtcggagggtgtcgtc
cagaacgcgctcgacaaagctgctgctggacgcacaaccatcaccatcgcacatcgtctg
tccaccatcaaggacgccgactgtatctatgtcgtgggtgacggactcatcctcgagaag
ggcaagcacaacgaactgctcaaagacgagaatggagcctacgcgcgcctagttgctgcg
cagaagttgcgggacacgcgggacttggagcccaaggaaattgaagacgacattaccgaa
ggtgacgcggaggaagatatcgagaaggccgcggaagaagagattccactaggccgccgg
aatacgcaacaatcccttgccagtgcgattctgcatgagcgccagcagcagaaggctgcc
ttgggagagaagtcttactcagtctcacatttgttcatgcgcatggccagaatcaacaag
gacgagtggatgaaatacgtgtatggttgtatctttgctgctatgactggcgctgttttc
cccgcgttcggcattgtctggtccaagacaatcaacggcttttcgctcccagatgcccag
gaacgccggcacgctggtgatcgcaatgctctttggctattcatcatcgccatcatttct
atgtttacgatcggcttccagaactacttctttgctgcttccgccgcttcgctcactcaa
aagctgcgctcgcttagtttccgtgcagttctcaggcaagacatcgagtattttgataaa
gaagagaacagtactggttcgttggtttctaatcttagtgacgcaccacaaaagatcaat
gggttggctggcatcactttgggagcaattgtgcagagcttatcaaccctggtcctcggc
gtcattctaggtcttatcttcatttggaaggttggccttgttggccttgcctgtgttcct
ctcgtagtatcgactggttatattcgcctgcgtgttgtggttttgaaggaccaatcgaac
aagaaagcacacgaggattcagcccaattagcttgcgaagccgcagcttccattcgtaca
gttgcatcgttgacgcgagaagaagactgcttacgcctgtacagcgagtctctagaagag
ccgatgcagaaatctaacaggacggcggtttggtcgaacggcctgtactcactgtcacag
tcattctcgttcttcgtcattgcccttgtattctggtacggctcgcgtctcgtctcgttc
caagagtttactaccgtcgacttcttcattggtctcatgagtactgtctttggcgccatc
caagcaggcaatgtattctcgttcgtgcccgatatctcgtcagcaaggggtgctgcagcc
gatatcatccatttgttggactccacacctgaagttgatgccgagtcgaccgaggggaaa
ataccccagaatgttcaaggccatatcgagctcgagaatgtccacttccgttacccgaca
aggccgggggtgcgcgtgcttcgtggtctgaacatcactgtcaagcctggcacgtacgtc
gcgcttgtcggcgctagtggctgcggcaaaagtacggtcattcaactcttggaacgcttc
tatgaccctctggctggcaacgtacttctcgatggtcagaacatctccgagatgaatgtt
caagaataccgcaagaacatcgccttggtctcccaagagcctactctttatgctggcaca
gtcaaattcaatattttacttggggcgaccaagccaaccggggaagtcactcagaaggaa
ctggaagacgcatgccgcaatgcgaacattttggagttcatcgagagtttgccagatggc
tttgagaccgaagttggtgggaagggttcgcagttgtcaggaggacagaagcaacgcatt
gccattgctcgtgcactccttcgtaatcccaaagttctcctgttggacgaggcgacttcg
gctctggattctaactctgagaaaatcgtccaagctgcccttgattccgcagcgaagggt
cggacaacgattgccatcgcacatcgattgtcgacgatccaaaacgcggactgcatatat
ttcatcaaagaaggatgcgtgagcgaagcaggcacacacgacgagctacttgcgctgcgc
ggtggatattacgaatacgtccagcttcaagcgttgagcaagcagtga
DBGET
integrated database retrieval system
