Heterobasidion irregulare: HETIRDRAFT_460980
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Entry
HETIRDRAFT_460980 CDS
T03455
Name
(RefSeq) hypothetical protein
KO
K12854
pre-mRNA-splicing helicase BRR2 [EC:
5.6.2.6
]
Organism
hir
Heterobasidion irregulare
Pathway
hir03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hir00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
HETIRDRAFT_460980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hir03041
]
HETIRDRAFT_460980
Enzymes [BR:
hir01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
HETIRDRAFT_460980
Spliceosome [BR:
hir03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
HETIRDRAFT_460980
Complex C
U5 SnRNP specific factors
HETIRDRAFT_460980
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
WHD_SNRNP200
Helicase_PWI
ResIII
Helicase_C
BRR2_plug
AAA_22
PhoH
T2SSE
ASCC3_N
DEXQc_Suv3
Motif
Other DBs
NCBI-GeneID:
20677129
NCBI-ProteinID:
XP_009551962
JGI:
Hetan2_460980
UniProt:
W4JQ86
LinkDB
All DBs
Position
Unknown
AA seq
2165 aa
AA seq
DB search
MSGQKRDLSGYNYGAISSLVLTADRSALPRRDREPDGAPTSLAGRIDPKEMGSRVQRQAP
KDVDKKKKKASDKQDPTERQLTKRKAETTGFGYTDIIEATQDVEGLTYRPRTTETREVYE
LILSTVHRSLGDQAQDVVRSAADTVLETLKNDAMKDFDKKKEVEQVVGSISNEAFSQLVN
LSKKITDYGAEDETMVDPDMERKDAEIDEEMGVAVVFDEEEQESEEEEGYEVRDESDEEE
EDEGDEPPPDEDGEEGLVIGGATSGSGRAKAKQDKDIVSPHSIDGFWVQRQVSEVYPDPV
TAADKASSVLSILGSESSLRDCENQLMELFDYQSYDVITKFLKNREVVVWCTKLARSDAD
ERVNVEVAMREKGLGWILRELTGDRQAKARTDAMDIDDEAKPVNVPKTATLVPGSTLQPK
KTVDLEGMAFSQGGHLMSNKKCKLPEGSFKRAKKGYEEIHVPAPKQKTTAASDLVPIADL
PAWAREAFPGTKSLNRVQSKLYPVAFGTDEPILLCAPTGAGKTNVAMLTILNEMSKYRDE
ATGAFDLDAFKIVYVAPMKALVQEMVGNFNSRLNPFGIKVGELTGDSQMTKQQISETQII
VTTPEKWDVITRKSSDTSYTNLVRLLIIDEIHLLHDERGPVLESIVARTIRRMEQTSDYV
RLVGLSATLPNYEDVATFLRVDESKGLFYFDASYRPCALQQQFVGVTEKKAIKRYQVMNE
VCYEKVLDQAGKNQTLVFVHSRKETAKTAKFIRDMAIEKETITQFVKPDSAVREILTEEA
NNVKDANLRDLLPFGFAVHHAGMSREDRGLVEELFADGSVQVLVCTATLAWGVNLPAHTV
IIKGTQIYNPEKGRWVELSSQDVLQMLGRAGRPQYDTYGEGVIITNHSELQYYLSLMNQQ
LPIESQFVSKLADNLNAEIVLGTIRNRDEAVQWLGYSYLYVRMLKSPGLYGIGVDYQEDD
GNLIQKRADIAHSAAVLLEKCHLIKYERASGRFQSTELGRIASHYYVTHNSMATYNQHLK
PTMSTLELFRVFALSNEFKLIPVRQEEKLELGKLLERVPIPVKEGVEEPASKINVLLQAY
ISQLKLDGFALVADMVFVQQSAGRILRAVFEICLKRGWAIPARAALDMCKMVEKRMWGSM
TPLRQFKGVPSEIIRKAEGKQFPWYRYFDLSPPEIGELLGIPNAGRLVHRLVHNFPKLQL
QAQVQPITRSLLRIDLSIIPDFRWDEKVHGNAESFLITVEDVDGEVILFHDSFVLRQRYA
EDEHNVTLTVPMFEPVPPNYYITVNSDRWLHAETRLPISFKHLILPEKFPPPTPLLDLQP
LPLSALHNKEFESIYSTTLQTFNKIQTQVFQALYTSDENIFIGAPTGSGKTICAEFALLR
LWSKREQKRAVCIEPYQEMVDQRVAEWRNKFGQLQDGKEIVGLTGETSADLRLLEKGDVI
VCTPLQWDVVSRRWRQRKNVQNIGLLIADEVQLVGGEVGPTYEVVISRTRYVSAQTEIKT
RIVACGVSLANARDLGEWIGAPSHAIFNFPPSARPLDMDIHLQSFTIPHFPSLMIAMSKP
AYLSILEYAPTKPVIIFVPSRKQCKMTADDLLLHCSADDNEDRFLNIELADLQPHLDHVS
DRTLVETLKHGVAYYHEALSKQDKRVVERLFQSGAVQVLIASKDTAWSIPVASYMVIIMG
VQFYEGKEHRYVDYPVMDVLQMMGRACRPTEDDRSRCVLMCQQTRKDFYKKFLAEGLPIE
SHLPTHLLHDYFLAEIAVRTIENKQDAMDILTWTYFYRRMTQNANYYNLHNVSHQHLSDH
LSELVENTLNDLVNSKCIAIEDEMDVSPLNLGMIAAYYNISYVTVEVYTLSLKERTKLKG
LLEVVSSSAEFENIPIRRHEDSLLRRIYDRVPVKLDHADFEAPHFKTFLLLQAHFSRLTL
PPDLVADQALVLEKVLNLLSACVDVMSSNAWLNALGAMDLSQMCVQAMWETDSPLKQIPH
FELDVVKRCKEAGIESVYDVMEMEDDKRNALLQMNSPQMRDVAAFVNSYPTLDVTHELVK
GEYTAGGPIVLQVALSKDADEEEEAGDASVVAPYFPGKKLANWWVVVGEPSTRQLHSIKR
VTVTRSLNVKLEFTLPKGTHSLKLYVICDSYVGADHDIPLDPIDVAEGEDSDSDDDDGSD
DAMEE
NT seq
6498 nt
NT seq
+upstream
nt +downstream
nt
atgtctggtcagaagcgggatttgtctggctacaactatggcgccatctcttctttggtt
ttaacagcagacagatctgctttgccacggcgcgacagggaacccgatggcgcacctacg
tctctcgccggacgaattgaccctaaagagatggggtcgcgtgtccaaagacaggcaccg
aaggatgttgataagaagaagaaaaaggcttccgacaagcaggatccgacggagaggcag
ctgacgaaacgcaaagccgagacgactggttttggctacacagatatcatcgaggccact
caggatgttgaaggtctcacgtatcgaccacgaactactgagacgcgcgaggtttacgaa
ctcattctttctaccgtccatcggagtcttggggaccaggctcaggatgtcgttcgcagc
gctgcagacacggttcttgagacgttgaagaacgatgcaatgaaggatttcgacaagaaa
aaggaggtcgagcaggtcgttgggtcgatatccaatgaggctttttctcagctggtcaac
ctctccaagaagatcaccgactacggtgcagaagatgagaccatggtagatccggatatg
gagaggaaagatgcagagattgacgaggaaatgggtgtcgccgttgtctttgatgaagag
gagcaagagagcgaggaagaggaagggtacgaggtacgggacgagtctgacgaggaggag
gaggatgagggtgacgagccaccgccagacgaagacggcgaggaggggctggttattgga
ggagcgacatcaggatcaggacgggccaaggccaagcaggacaaggacatcgtttctcca
cactccattgacggtttctgggtgcagcgacaggtatccgaagtctaccctgaccccgtg
acagccgcagacaaagcctcgtctgtactttcaattctcggctccgagtccagtttacga
gactgcgaaaaccagcttatggagcttttcgactatcagagctacgatgtcatcaccaag
ttcctcaagaaccgcgaggttgtcgtctggtgcacgaagctcgcgcgcagtgatgcggac
gaacgggtcaacgtcgaggttgcgatgagggagaaggggcttggttggattctacgggaa
cttactggtgatcgtcaggcaaaggcgcggacagacgccatggacatcgatgacgaggca
aagcccgtcaatgttccaaagacagcgactcttgtgccgggctcgaccttgcagccgaag
aagacggtcgacctcgagggcatggcatttagccaaggcggtcacctaatgtcaaacaag
aagtgcaaactcccggagggttcgttcaaacgtgcgaagaagggttatgaggaaattcat
gtacctgcacctaagcagaagacaaccgccgccagcgacctcgtcccaatcgccgacctt
cctgcctgggcaagagaagccttccctggtaccaagtcgttgaacagagtacagagcaaa
ctctaccccgtcgctttcgggacagatgagcccattctcctctgtgctcctacaggagct
ggcaagaccaacgtcgctatgttgacgatcttgaacgagatgtccaaataccgagacgag
gcaacaggcgctttcgacctggatgccttcaagattgtttacgttgctcctatgaaggcc
ctcgtgcaggagatggttggaaacttcaactctcgcctcaacccgttcgggatcaaagtc
ggcgaattaacaggtgactcgcaaatgacgaagcaacagatctccgagacccagatcatc
gtcacgacacccgaaaagtgggatgtcatcacccggaagagttctgacacgagctacacc
aacctcgtacgactgctcatcattgacgagattcacttgttgcacgacgaacgtggtccg
gtcttggagagcatagtggcgcgcacgatccggcgcatggaacagacatctgactacgtg
cgtctggtaggtctctctgctacgctcccaaactacgaagacgttgcaactttccttcgt
gtcgacgagtccaaggggctgttctattttgatgcttcgtaccgcccttgtgcactccag
cagcagtttgttggcgtgacggagaagaaggctatcaagcgctaccaggtgatgaacgag
gtctgctacgagaaggtcctggaccaggcaggcaaaaaccagaccttggtctttgttcat
tctcggaaggagacagcgaagactgccaagttcatccgtgatatggcgatcgagaaggag
acgattacacagttcgtcaagcctgattccgccgtccgcgagattttgaccgaggaagcc
aataacgtcaaagatgccaacctccgcgaccttctcccatttggctttgctgtccatcac
gctggcatgtcacgcgaggatcgtgggcttgttgaagaattgttcgccgacggatctgtc
caggtactcgtgtgtactgctactctggcctggggtgtgaacttgcctgcgcacaccgtt
attatcaaggggactcagatctataaccctgagaagggtcggtgggttgagttgtcctcc
caggatgtcttgcagatgctcgggcgtgcaggtcgcccgcagtacgatacctatggtgag
ggcgtcatcatcaccaaccattcagagctgcaatactacctgagcttgatgaaccagcaa
cttcccatcgaatcacaattcgtgtcgaagttggctgacaatctgaatgcggagattgtt
ttggggacaatacgaaacagagatgaagctgttcaatggctcggatattcctacttgtac
gtccgtatgctcaagtcgcctgggctttatggcattggtgtcgactaccaagaggacgac
ggcaatttgatccagaagcgtgcagacatcgcccactctgctgctgtcctgctggagaaa
tgccatctcatcaaatatgagcgcgcatccggtaggtttcagagcacggagctgggccgc
attgcgtcccactactacgtaacacacaactccatggctacttacaatcaacacttgaag
ccgacaatgtcaaccttggagttgttccgggtatttgcgctatcgaatgagttcaagttg
atccccgttcgtcaggaggagaaacttgagctgggcaagttgttggaacgcgttcctata
cctgtcaaggaaggtgtagaggagcctgcttccaagattaatgttcttctgcaggcgtac
atctcccagttgaaacttgatgggtttgctcttgttgctgacatggtttttgttcagcag
tcggctggacgcattctccgtgctgtctttgaaatttgtttgaagcgaggctgggctatt
ccagctcgtgctgctctagacatgtgtaaaatggtcgagaagcgcatgtggggttccatg
actcccttacgccagttcaagggtgttccctctgaaatcatcaggaaggcagaaggaaaa
caattcccctggtatcgttacttcgatcttagcccacctgagatcggagagctgttaggc
attcctaatgcgggacggcttgttcaccgccttgtacacaactttcccaagcttcagcta
caagctcaggttcagcctatcacacgctcccttcttcgtatcgatctctccataatcccc
gatttccgttgggatgagaaggttcatggcaatgccgaaagcttcctgatcacggttgag
gatgtcgatggagaggtcattcttttccacgactccttcgttcttcgtcagaggtacgct
gaagatgagcacaatgtgacgctcaccgtgccgatgttcgagcccgttccaccgaactac
tacattactgttaactcggaccggtggctacatgcagaaactcgacttcccatctccttc
aagcacctcatcctacctgagaagttccctccacctacaccccttctcgatcttcaacct
ctccctctctccgcactccacaacaaggagttcgaaagcatctactcgactacacttcag
acgttcaacaagattcagacacaagtgttccaagcgctttatacctcagatgaaaacatc
ttcattggtgcgcccacaggcagcgggaagaccatttgtgccgagttcgctctactgcgg
ttgtggagcaaacgcgaacagaagcgcgcagtctgcattgagccatatcaggagatggtt
gaccaacgggtagccgagtggcggaataagttcggtcaactgcaggatgggaaggagatt
gtaggtttgactggtgaaacaagcgcagacttgcgcttgctcgagaagggtgacgtcatt
gtatgcactcctctgcagtgggacgtggtctctaggcgttggcgacaacgtaagaatgtt
caaaacattggcctcctcattgcggatgaggtccagctcgtcggtggcgaagtcggaccc
acatacgaggttgtcatctcaaggacacggtacgtgtctgcccagaccgagatcaagacc
cgcattgtcgcatgtggtgtctcgctggccaacgctcgtgatcttggtgaatggataggt
gcaccttcacatgccatttttaacttccctcctagtgcccgaccattggacatggatatt
cacttgcagagcttcactatcccccatttcccatccctcatgatcgccatgtccaaaccc
gcctatctgtctatcctcgagtatgctccgaccaagcctgtcattatcttcgtaccctct
cgcaagcagtgcaagatgaccgccgatgatctgctactgcattgcagcgccgatgacaac
gaggaccggttcttgaacattgaattggcagacttgcagcctcatctagaccatgtcagc
gatcggacgttagtggagacgcttaagcacggagttgcatattaccacgaggccctcagc
aagcaagataagcgagttgtggaacgtcttttccagtccggcgcagtgcaagtgctcata
gcttcgaaggacactgcgtggagcatccctgtggccagctacatggtcatcatcatgggt
gtacagttctatgaaggaaaggagcatcgctatgtcgactatcctgtcatggacgtcctg
cagatgatgggtcgggcctgtcgtccaaccgaggatgacaggagtcgatgcgtgctgatg
tgtcaacagactcgaaaggacttttacaagaagttccttgcagaaggtttgcccatcgaa
tcgcaccttcccacacatcttctccacgattacttccttgcggaaatcgctgtccggacg
attgaaaacaagcaagacgcaatggacatcttgacctggacgtacttctaccgacgcatg
acgcaaaacgccaactactacaacttacacaacgtcagccatcaacatctttccgatcac
ctgtccgagcttgttgagaataccctcaatgaccttgtgaactcaaaatgtatcgccatt
gaggacgagatggacgtatctcctctcaacttgggaatgattgcagcctactacaacatt
tcttacgtcaccgtcgaggtgtacactctgtcgctgaaagagcgtacgaaactcaagggt
cttctcgaagttgtctcttcttctgccgagtttgagaacattcccattcgccgacacgag
gattcactgcttcgtcggatctacgaccgcgtaccggtgaaattggatcacgctgacttc
gaggcgccccacttcaagacgttcttgctcctccaggcacatttctcccgcttgactctt
ccgccagacttggtcgcagaccaagccttggtcctcgaaaaagttttgaacctgctctcg
gcatgtgtggatgtaatgtcgtccaacgcttggctcaacgctctaggcgccatggatttg
tcgcaaatgtgcgtgcaagcgatgtgggagaccgactccccactgaagcaaatcccgcac
tttgagctcgacgttgtcaaacggtgcaaagaggctggcattgaatctgtctacgatgtc
atggagatggaagatgacaagcggaatgcgctcctccagatgaattccccacagatgcgc
gacgttgccgcattcgtcaactcctaccctacgcttgatgtcacacacgagctcgtcaag
ggagagtacacagcgggcggccctatcgtgttgcaggttgcactcagcaaggatgcagac
gaggaggaggaggctggcgatgcctccgtcgtcgcgccgtacttccctgggaagaagctt
gccaactggtgggtcgtggtcggcgaacccagcacacgacagctgcactccatcaagcgc
gtgaccgtcactcggagcctcaacgtcaagctcgagtttacgctaccgaagggcacgcac
tcgctcaagctatacgtcatctgcgactcgtacgtcggcgccgatcacgacatcccgctc
gaccccattgatgttgcggagggcgaggatagcgacagtgacgatgacgatggcagcgac
gacgccatggaggagtag
DBGET
integrated database retrieval system
