Heterobasidion irregulare: HETIRDRAFT_468363
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Entry
HETIRDRAFT_468363 CDS
T03455
Name
(RefSeq) hypothetical protein
KO
K11801
DDB1- and CUL4-associated factor 11
Organism
hir
Heterobasidion irregulare
Brite
KEGG Orthology (KO) [BR:
hir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hir04121
]
HETIRDRAFT_468363
Ubiquitin system [BR:
hir04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
HETIRDRAFT_468363
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
Beta-prop_EML
WDR54
Beta-prop_EIPR1
Beta-prop_SCAP
NBCH_WD40
Beta-prop_WDR75_2nd
Motif
Other DBs
NCBI-GeneID:
20677230
NCBI-ProteinID:
XP_009540721
JGI:
Hetan2_468363
UniProt:
W4KNV1
LinkDB
All DBs
Position
Unknown
AA seq
496 aa
AA seq
DB search
MSGEFGRVQRKIDTQRKRDNVAKALLARRSRLRRTYREDITSTLVPNTNGTVVASYDHNI
YSGQFSNDSMFYYTCCQDFRLHVYDTTAPPIKPPPRSAPLRGRHGFVPPEHETTMKVIKT
IDGHPGRWTITDSHLSPDNERIIYSSITPTVYMTTTTDSSTVQTPIRLSDRDRQRWGEES
FGIYSCRFSADGNEVIAGGSGMIFVYDLLADRRTVKINAHADDVNSCCWADTASGNVLIS
ASDDTFLKVWDRRSLGTSKRPSGVLIGHTEGITNVSAKGDGRYIISNGKDQALRLWDLRK
MCTNEEYENVRHVTYGIPGYDYRYRHYPKPKVLAHPKDCSVMTYRGHTVLSTLIRCHFSP
AETTGGQYLYSGSADGRIHIWSLDGRVVQVLDRSRTLPITFDPSAPEPDQTSGTRAEVCV
RDVSWHSREPVILSAGWESGTMGSRSSVARHEWKGLTKMAPGRLEDYLERQRLQSGEVPQ
LQRMRIPGSFDEQDEV
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgagcggagaatttgggcgtgttcagcgaaagatagacactcaaagaaaaagagacaac
gtcgccaaagcattgctcgcgaggcggagcagattgcgaaggacctatcgcgaagacatc
acaagtactcttgttcctaacaccaacggaaccgttgtcgcttcttatgatcacaatatt
tattctggccagttctctaacgattcaatgttctattacacatgctgtcaagattttcgt
ttgcatgtatacgacaccactgctcctccaatcaaacctccaccccgttctgccccactt
cgaggacgccatgggtttgtcccccctgaacatgaaacaacgatgaaagtgatcaaaact
atcgacggacatcctggtcgttggaccatcaccgattctcatctcagccctgacaacgag
aggatcatctattcgtccattacgccaacggtgtatatgactaccacgaccgactcttca
acggtccagacgcccatacgtctttcagacagagacaggcagcggtggggtgaggagagc
tttggtatttacagctgccggttctccgcagacggtaacgaagtgattgcggggggtagc
gggatgatcttcgtctatgatttactggcggatcgtcgcacagttaaaatcaacgcgcat
gccgatgacgtgaacagttgctgctgggccgacactgcgtcaggcaacgtcttaatcagc
gcttcagacgatacgttcttgaaagtctgggatcggcggtcattggggacctccaagcgg
ccctccggcgtgttgattggacatacggaaggcattaccaacgtttccgcaaagggcgat
gggcgttatatcatttccaacggcaaagaccaagcccttcggttgtgggacttgcgcaag
atgtgcacgaacgaagaatacgaaaacgtgcgccatgtgacatatggcatacccggctat
gattatcgttatagacattatccgaagcccaaggtgctcgcccatcctaaggactgcagc
gtcatgacataccgagggcacaccgttctgtcgaccctcatccggtgtcacttcagtcca
gccgagacgacaggcgggcaatacttgtattctggatcagcagacggcagaattcatatc
tggtccttggatgggcgcgttgtacaggttcttgaccgttcacgcactctacctataact
ttcgatccctcggcaccggaaccggatcagacttctggtacccgtgctgaagtatgtgtg
cgcgacgtgagctggcattcgagggagcctgtcatccttagtgctgggtgggagagtggc
accatgggaagcagaagcagcgtcgcgcggcacgaatggaagggactcacgaagatggcg
ccgggtaggcttgaggactatctagagcgacagaggctccagagtggcgaagtgcctcag
ttgcagaggatgcggatcccaggctcctttgatgagcaagacgaggtgtag
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