Heterobasidion irregulare: HETIRDRAFT_470826
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Entry
HETIRDRAFT_470826 CDS
T03455
Name
(RefSeq) hypothetical protein
KO
K10842
CDK-activating kinase assembly factor MAT1
Organism
hir
Heterobasidion irregulare
Pathway
hir03022
Basal transcription factors
hir03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hir00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HETIRDRAFT_470826
09124 Replication and repair
03420 Nucleotide excision repair
HETIRDRAFT_470826
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hir03021
]
HETIRDRAFT_470826
03400 DNA repair and recombination proteins [BR:
hir03400
]
HETIRDRAFT_470826
Transcription machinery [BR:
hir03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
HETIRDRAFT_470826
DNA repair and recombination proteins [BR:
hir03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
HETIRDRAFT_470826
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MAT1
zf-C3HC4_5
zf-RING_5
zf-C3HC4
zf-RING_2
zf-C3HC4_2
zf-C3HC4_3
zf-rbx1
zf-RING_4
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
20677362
NCBI-ProteinID:
XP_009542532
JGI:
Hetan2_470826
UniProt:
W4KIL6
LinkDB
All DBs
Position
Unknown
AA seq
396 aa
AA seq
DB search
MANASRSNVGGWLRGTTIRKGTAASTPQTRSVTPQVQSTSSTVFGGGVKDPSGRTSEFFV
TTHLSRFALVAIAHSRPQSSDDQCPVCKSDRYLNAKLRLLVGACYHKMCESCIDRLYTLG
PGPCPFCAKILRKITFVPQTFEDLTVEKEVAVRRQIAKEFNKRREDFPDLRSYNDYLEEV
EDITFNLINDIDVRETEQRIMRFRKENAAVIERNLHREEAYAQALREQEDAERRERQLRA
DEARQADEAERQARETERRALIDSLENSDADAARLVARSRADALKRAQARTAAAAQAVQQ
SAALLLRTRAAQSAAVPDVPHVPLQDDWDAYEDKYVMRDNYFDPFSDAVRRDREGIMRAG
GYRVEEAWERALRCAVAGLDVVPLGEPSGDAVMTSC
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacgcgagtcgctcaaacgtcggtggctggctgcgcggcactaccatccgcaag
ggcaccgccgcctcgaccccccaaacccgctccgtcactccgcaggtacagagcacgtcc
tcgacggtgttcggcggaggcgtcaaggacccctcaggcaggacctcagagttctttgtg
actacacatctttccagatttgccctcgtcgcaatagctcactcacgcccacagtcctcg
gatgaccaatgccccgtatgcaagtctgaccgttatctcaacgcgaagctgcgcctcctc
gtaggagcttgctatcataaaatgtgcgagtcctgcatcgatcgcctgtacaccctcggt
ccgggtccatgtccattctgcgcaaagatcttgcggaaaatcacttttgtccctcaaact
ttcgaggacctcacggtcgagaaagaggtcgccgtgaggaggcagatagccaaagagttc
aacaaacgcagggaagacttccccgacctccgttcttacaacgactacttagaagaggtg
gaggatattaccttcaacctcattaatgacatcgacgtccgcgagaccgaacagcgcatc
atgagattccgcaaagaaaacgctgctgtcatcgagcgcaatctccatcgcgaagaggcc
tatgcgcaggcccttcgcgaacaagaagatgccgagcggcgcgagcgccagctccgcgcg
gacgaggcgcgccaggctgacgaggcagagcgccaagcgcgcgaaacagagcggcgcgcg
ctcatcgactcgctcgagaacagcgacgctgacgccgcgcggctcgtcgctcgctcccga
gcggacgcgctcaaacgtgcccaggctcgcaccgccgcggcggcgcaagcggtgcagcag
agtgccgcgctcctcctacgcacgcgcgcagcgcagagcgcggcggtacctgatgtcccg
cacgtcccgctgcaggacgactgggacgcgtacgaggacaagtacgtgatgcgcgacaac
tacttcgatccgttcagtgatgcggtgcggagggatcgggaaggcatcatgcgggcgggc
ggttacagggtggaggaggcttgggagcgcgcgctgagatgtgcggtggcgggattagat
gtagtgccattgggcgagccgagtggggacgcggtgatgacttcatgttaa
DBGET
integrated database retrieval system
