Heterobasidion irregulare: HETIRDRAFT_471043
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Entry
HETIRDRAFT_471043 CDS
T03455
Name
(RefSeq) hypothetical protein
KO
K12587
exosome complex component MTR3
Organism
hir
Heterobasidion irregulare
Pathway
hir03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HETIRDRAFT_471043
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hir03019
]
HETIRDRAFT_471043
Messenger RNA biogenesis [BR:
hir03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
HETIRDRAFT_471043
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
20677375
NCBI-ProteinID:
XP_009542662
JGI:
Hetan2_471043
UniProt:
W4KLD2
LinkDB
All DBs
Position
Unknown
AA seq
270 aa
AA seq
DB search
MALAAFDRRRINGPDESFPPVFDESESADTSYSSWTVGEARQGRQPLDIRPICAQVVLKA
GLISQANGSAYIETERTKVACAVYGPRQSKNTGYNENGRLNVEVKFAPFSCGKRRAPLRD
AEDRSIAVLIQQALIPSVRLELLPKSVIDIFITVIECDGIEGCIAVASVAASTALADARI
ELLGLAVACSACVVNREIWLDPTEEEGHLAEGSLVFACIPALGIVTNTWQTGRILPQDTL
QCLESCQERCTDIHQIVSRALLDSAEKSIT
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atggctctcgctgctttcgatagaaggcggatcaatggcccagacgaaagctttccgcct
gtctttgacgaatccgagtcggccgacacctcgtactcgtcttggacggtaggcgaagca
cgtcaaggccgacaaccactcgacatccgaccaatatgtgcgcaggtagttttgaaggca
ggactcatcagtcaggctaacgggtcagcttatatcgagactgaacgcaccaaagttgca
tgtgcggtatatggaccccgtcaatcaaaaaacactgggtataatgagaacgggagattg
aacgttgaagtcaagtttgctccattttcatgtggcaagagaagggcaccgcttcgagat
gccgaagatcgatccatcgcggtcctcatacaacaagctctgattccctctgtccgactg
gagttgctcccgaaatccgttatcgatatcttcattactgtcattgaatgcgacggaata
gaaggatgtatcgccgttgcatctgtagctgcctctacggcactggcagatgcgagaata
gagctcctagggttagctgtcgcttgttccgcctgtgtagtaaacagggaaatttggctg
gacccaacagaagaagagggccatctggcagaaggcagcttggttttcgcctgtatccct
gccttgggtatagtcaccaacacatggcagacagggcgtatcctgccgcaggacacattg
cagtgtctagagtcttgtcaggagcgttgcacagatattcaccagattgtttctcgagct
cttttagatagtgcagaaaaatcaattacatga
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integrated database retrieval system
