Heterobasidion irregulare: HETIRDRAFT_472359
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Entry
HETIRDRAFT_472359 CDS
T03455
Name
(RefSeq) hypothetical protein
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
hir
Heterobasidion irregulare
Pathway
hir03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
hir00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
HETIRDRAFT_472359
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hir03009
]
HETIRDRAFT_472359
Ribosome biogenesis [BR:
hir03009
]
Eukaryotic type
Pre-60S particles
RNases
HETIRDRAFT_472359
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EloA-BP1
RNase_T
zf-CCCH_tandem
CHORD
Motif
Other DBs
NCBI-GeneID:
20677454
NCBI-ProteinID:
XP_009543708
JGI:
Hetan2_472359
UniProt:
W4KFZ8
LinkDB
All DBs
Position
Unknown
AA seq
563 aa
AA seq
DB search
MFSPLGLFHSLPCPNKSQCRRKNCLFSHKSGVVENPVSIPYDTPQPVASSSALASRSSVP
AKRPAASSPTHALSSANAASSLHPQRKLQKVGTTQKPLALPTASRTPTGVPVLRVNAAQS
KIPVATRQTMLKSLYDHFVVLYDAVLPQEPSLASEHALRQEEEIYNRASKSTYRNAVITS
IASIKSRPPPTNISHPSIGTTNDIAARTAEAHALTSLNLTSAHLMPLILSRDQLQKWGFL
AEIPEPWGPGGQSPSAEGSRVKCERCAVAYVVQPLAEGKASADECTYHWGKAVTRNINGE
RMRMYTCCHRPTTEGGGCTQGPHVFYESDLASLHARHPFSSLKPSSFEGKKKERDVVALD
CEMIYTTGGFRVARVSIVDARGQEIFDELVKMDDGVEVVDFNTRFSGITATQYAAKARRS
LREIRCSLDEFLSQDTILLGHGLENDLRTLRIMHHRCVDTAILFEHPRGFPFRKALRDLT
KEHLGRTIQTGGGTAGHSSIEDSIATLDLVKWFVYNKVRQPPLSAATPATGTSSSRSITM
AVGSFRPALDNVRAPPAKEAFRI
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgttctcacctctcggcctcttccattctctcccttgtccaaataaatcgcaatgcagg
agaaaaaactgtctgttctcccacaagtcaggcgtcgttgagaatcccgtttctattccg
tatgacaccccacagcctgtcgcctcatcctctgcccttgcatcgcgttccagcgtccca
gccaagcgccctgctgcctcgtctcccacccatgcgctgtcatctgcgaatgctgcatct
tctctacatccacaacggaagcttcagaaggttgggaccacgcagaaaccgctcgctctc
cccaccgcgtcgcgtacacccacaggcgtgcctgtgctcagagtcaatgcagcacagtcc
aagattccagtcgcgacgcgccagacgatgctcaagtccctatacgaccatttcgtcgtc
ctgtatgatgctgtgctgccccaggagccctctctggcctccgaacatgccttgcgacaa
gaagaagaaatatacaatcgcgcaagcaagtcgacataccgtaatgccgttatcacgtcc
atcgcctctattaaatcgcgtcccccaccgacaaatatctcccatccctctataggcact
acgaatgatattgcagcgcgcactgctgaggcccacgcactcacttctctcaaccttact
tctgcgcacctcatgcctctcattctcagccgtgaccaattgcaaaaatggggctttctt
gctgagatacctgaaccatggggcccaggcggccagagtcccagtgcggaaggttcgaga
gtgaaatgcgaacgctgtgccgtggcatatgtcgttcaacccctggctgaagggaaggcg
agtgctgacgaatgcacttatcactggggaaaggcggtgacccgcaacatcaacggtgaa
agaatgagaatgtatacctgttgccatcgacctacgactgagggcggaggatgcacgcag
gggcctcatgttttctacgagtccgacctggcgtctctacacgcgcggcatccattttct
tccctgaaaccctcctccttcgaaggcaagaagaaggagagagatgtggtggctctagat
tgcgagatgatctacaccacgggtggtttccgcgtcgcgcgcgtgtcgatcgtcgacgcg
cgcgggcaggagatatttgacgagctcgtgaagatggatgacggtgtggaagtggtcgac
ttcaacactcgcttctccggcatcacggcgactcaatacgcggccaaagcgcggcgttcc
ctccgcgaaatacggtgttcccttgatgagttcttgagccaagataccatcctccttggg
cacgggctcgagaacgacctgcgcacgttgcgtatcatgcaccatcgctgcgttgacacc
gccattttgtttgaacatccgcggggatttccattccgcaaagctctccgtgatctcacg
aaagaacatctcggccgtacgattcagacaggcggtgggacggctggccattcctcgatt
gaggactcgattgcgacgctcgatctcgtcaaatggttcgtatacaacaaggtcaggcaa
ccgccgctcagcgcagcgacgcctgccactggcacatcgagctcgagatctatcacgatg
gctgtcggatccttcaggccagcgttagataacgtgagagctcctcctgcgaaggaagca
tttcggatttag
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integrated database retrieval system