Heterobasidion irregulare: HETIRDRAFT_472831
Help
Entry
HETIRDRAFT_472831 CDS
T03455
Name
(RefSeq) hypothetical protein
KO
K11790
denticleless
Organism
hir
Heterobasidion irregulare
Brite
KEGG Orthology (KO) [BR:
hir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hir04121
]
HETIRDRAFT_472831
Ubiquitin system [BR:
hir04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
HETIRDRAFT_472831
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_RFWD3
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_SCAP
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
EIF3I
Beta-prop_IFT140_1st
Beta-prop_EML
Beta-prop_HPS5
WDR90_beta-prop_4th
Beta-prop_DCAF12
Beta-prop_Vps41
eIF2A
Beta-prop_NUP159_NUP214
B-prop_COPA_B_2nd
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
20677480
NCBI-ProteinID:
XP_009543979
JGI:
Hetan2_472831
UniProt:
W4KF06
LinkDB
All DBs
Position
Unknown
AA seq
466 aa
AA seq
DB search
MLDVAVDPQPRQRRMTVHGMMSMNAMSRPRAVFRQLPLPTHSILQSFVSSHKADVFKCQS
LHSNTFLTPPYACSYSHTAKKGGIPLLAVATEQGAVHILNTSKRTDWDYELQRTVLDIHQ
NGVFDVQWSHSDELLATVSGDQSTRVTDLATSKTLHILRNHTSTVKTVAWDPVNPNMLST
GGRDGVICLWDMRAQGQRSSESGIDVLTPVLRIPCAGGHVVKARRATTPTMKSVTSVLYL
DGDPFGLTSSSSFDGILRHWDIRLPTSPHKGKSALRMIQPTHVSSFDPTTVDGSRRPRGI
ASLVAGAGPSAGLLFGLGTDSRIHTYIASALLALPSTEMNSFAHSSMQTNSFYVRLALSP
NGRWLLSGSASRTGSAFLFDVSCAGRTRPILSGSRSIPSQGVEIKGQTGEVGAVDWAEGM
VATCADDGTVRIWRDDRDIARMCEANADNAKWDWAWAVDGGQPSNA
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgttggatgttgcagttgaccctcaacctcgccagcgaagaatgacagttcatgggatg
atgagcatgaacgccatgtcacggcctagagctgtcttccgtcaactacctctacccacg
cattccatcttacagtccttcgtctcttcgcacaaggcggacgttttcaaatgtcaatct
ctgcattcaaacacgttcttgactcccccgtacgcgtgctcatatagtcatacggctaaa
aagggtggaataccacttctggctgttgccaccgaacaaggcgcagtccatatattgaat
acctcaaagcgaactgactgggattacgaactacagcggacagttcttgatatccaccaa
aacggcgtcttcgatgtccaatggtcacacagcgacgaactactcgctacagtttctggt
gatcagtccacgcgtgtcactgatttggccacgtccaaaacactgcacatcctgcgaaat
cacacgagcacagtcaaaacagtcgcttgggacccagtcaatccaaacatgctgagcact
ggtggacgcgatggagttatttgtctgtgggatatgagggcccaaggtcaaagaagtagc
gaaagtggcatcgatgtactgacgccagtgctgcgaatcccgtgcgctggaggacacgta
gtcaaagctagaagagcgacgacgccaactatgaagagcgtgacgagtgtgttgtatctt
gacggggatccgttcgggctgaccagcagcagctctttcgacggtatcctccgccattgg
gatatccgacttccaacgtccccgcataaaggcaagtctgcgttgcgaatgattcagccg
acgcatgtatcttccttcgaccctactacggtggacggctctcgtcgaccccgaggcatc
gcatcacttgtagctggtgcaggaccatccgcgggcttgttgttcggactgggcacagac
tccagaatccatacctatatagcctccgctttgcttgccctgccatccactgagatgaat
tcattcgcacattcaagcatgcaaacgaattcgttctatgttcgcctcgcgctttcaccc
aatggtcgatggctattgagcggcagtgccagtcggactggttctgccttcctttttgat
gtgtcttgcgctggaaggacacgtcctatattatctggatcgcgttcaataccctcccag
ggagtagagatcaaaggtcaaacgggagaggttggagcagtggattgggctgaagggatg
gttgctacctgtgcggacgatggaaccgtcaggatttggagagacgacagagacatcgcg
cgaatgtgcgaggcaaatgcagataatgccaagtgggattgggcctgggcggtggatggg
ggacagccgtcgaatgcctag
DBGET
integrated database retrieval system