Heterobasidion irregulare: HETIRDRAFT_473222
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Entry
HETIRDRAFT_473222 CDS
T03455
Name
(RefSeq) hypothetical protein
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
hir
Heterobasidion irregulare
Pathway
hir03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hir00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
HETIRDRAFT_473222
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hir03041
]
HETIRDRAFT_473222
Spliceosome [BR:
hir03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
HETIRDRAFT_473222
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nop
Prp31_C
PaaA-like_N
Motif
Other DBs
NCBI-GeneID:
20677501
NCBI-ProteinID:
XP_009544205
JGI:
Hetan2_473222
UniProt:
W4KFB4
LinkDB
All DBs
Position
Unknown
AA seq
483 aa
AA seq
DB search
MSEGDEEGGEGGDEKQAGGLVLEGGVKPAEELDAEEVQRMELGGIDDVTKVAKLEGSKRM
ADILKEIEKYQAQPSPAEQMALPAHSNPEYNVIVQANNLSVDVDNEILVFIRDHYAPKFP
ELEQLVADPNMYIRAVRVLANHEDPTKADLQGVLPPAVIMSVLVTATTTSGQPLTEAAWN
TVERACDLADRLEEARKKIFMYVSSRMNMLAPNLSAIVGTTTAAKLLGVAGGLAGLAKMP
ACNVHLLGAQRKIAAGFSSATQRRHTGFVYQSELVQQTPAEYQLKLQRAVGAKSVLAARM
DLERRRRDGGYGDELRDKIEKHLDRLTAPPPSKVVKALPIPNDGPKKRRGGKRARKAKEA
YAQTELRKLSNRMAFGEAEEEVGAFDQTKGLGMIGGGTGKVRASMGEAKSRAKMSKANKL
RTAALTRAAQSSQASGTASSLVVTPVQGFELTNPAAAAQRVKEANDRWFAGGTFSFVGQK
GSG
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagggcgacgaggagggcggcgaaggcggcgacgagaagcaggcgggcgggctc
gtgctggagggcggcgtgaagcccgcggaggagctcgacgcggaggaggtgcagcggatg
gagctgggcgggatcgacgacgtgaccaaggtcgcgaagctcgaaggcagcaagcgcatg
gcagacatcctcaaggagatcgagaagtaccaggcgcagccctcgcccgcggagcagatg
gccctgcccgcgcactccaacccggaatacaacgtcatcgtgcaggcgaacaacctctcc
gtcgacgtggacaacgaaatcctcgtctttatccgagaccattacgccccaaagttcccc
gagctcgagcagctcgtcgcggaccccaacatgtacatccgcgcggtccgcgtgctcgcg
aaccacgaggacccgaccaaagcagacctgcaaggagtcctgccgcccgcggtcatcatg
agcgtgctcgtcacggcgacaacgacctccggccagcctctcacagaagcagcatggaac
accgtagaacgcgcatgcgacctcgccgaccgcctcgaggaggcccgcaaaaagatattc
atgtacgtgagttcgcgtatgaacatgctagcgcccaacctatcagccatcgtcgggacc
accacagccgcgaaactcctcggcgtcgccggcgggctcgccgggctcgcgaagatgccc
gcgtgcaacgtccacctgctcggcgcgcagcgcaagatcgcggcggggttctcgtcggcg
acgcagcgccgccacacgggcttcgtgtaccagtccgagctcgtgcagcagacgccggcc
gagtaccagctgaagctgcagcgcgcggtcggcgccaagagcgtgctcgccgcgcggatg
gacctcgagcggcggcggcgcgacggcgggtacggcgacgagctgcgcgacaagatcgag
aagcacctcgaccgcctgaccgccccgccgccctccaaagtcgtcaaggcgctccccatc
ccgaacgacggccccaagaagcggcgcggcggcaagcgcgcgcgcaaggcgaaggaggcg
tacgcgcagacggagctgcggaagctctcgaaccggatggcgttcggcgaggcggaggag
gaggtcggcgcgttcgaccagacgaaggggctcggcatgatcggcggcggcacgggcaag
gtccgcgcgagcatgggcgaggcgaagtcccgcgcaaaaatgtccaaggcgaacaagctg
cgcaccgcggcgctcacgcgcgccgcgcagtcctcgcaggcgtccggcacggcgtcgtcc
ctggtcgtcacgcccgtgcaaggcttcgagctgacgaaccccgctgcggcggcgcagcgc
gtcaaggaggccaacgaccggtggttcgcgggcggcacgttctcgttcgtgggccaaaaa
gggtcaggctag
DBGET
integrated database retrieval system