Heterobasidion irregulare: HETIRDRAFT_473278
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Entry
HETIRDRAFT_473278 CDS
T03455
Name
(RefSeq) hypothetical protein
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
hir
Heterobasidion irregulare
Pathway
hir03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hir00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
HETIRDRAFT_473278
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hir03041
]
HETIRDRAFT_473278
Enzymes [BR:
hir01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HETIRDRAFT_473278
Spliceosome [BR:
hir03041
]
Complex A
U2 snRNP components
U2 related factors
HETIRDRAFT_473278
Complex B
HETIRDRAFT_473278
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
ResIII
KH-I_KHDC4-BBP
NuDC
Motif
Other DBs
NCBI-GeneID:
20677507
NCBI-ProteinID:
XP_009544228
JGI:
Hetan2_473278
UniProt:
W4KFF6
LinkDB
All DBs
Position
Unknown
AA seq
698 aa
AA seq
DB search
MVGINGRLRERLDDTNEAGADDAEEGVVEDELDATELNPEDILALAAKKARKKDLATVDH
SRIPYEPFRKEFYIPPPDVAAMTDEEAELLRLELDSIKIRGVECPRPVTKWSHFGLPASC
LDVIKRLNYTSPTSIQAQAIPAIMSGRDVIGVAKTGSGKTVAFLLPLFRHIKDQRSLDQM
EGPIAIIMTPTRELAVQIHRDCKPFLKVLNLRAICAYGGSPIKDQIADMKKGAEIIVCTP
GRMIDLLTANSGRVTNLKRVTYLVLDEADRMFDMGFEPQVMKIINNIRPDRQTLLFSATF
PRQMDSLARKILRKPLEITVGGRSVVAAEIDQIVEVRAEDTKFNRLLEVLGQMYNDDPEA
RTLIFVDRQEAADNLLRELMRKGYLCMSLHGGKDQVDRDSTIADFKAGVVPIVIATSVAA
RGLDVKQLKLVINYDAPNHMEDYVHRAGRTGRAGNKGTCITFITSEQDRYSVDIYRALKA
SEANVPQELEELANGFLEKVKTGKAQAAGSGFGGKGLDRLDKERDAREKAERKAYGEPEE
EQKAAEEATSTKKETTDDMTFGNFKVEIKRGPAPDSSKGQLGDVGRKVNPDATDFHAIIP
INDYPQKARWRVTNKETMVQLIDMTGASVTNKGIYYEQGKEPPSEGPPKLHLLIESNEEW
RVEHAVREIKRLLIEASAAALQAEMRNPTAPSGRYSVV
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atggtaggcatcaatggtcgtcttcgtgaacgactggatgatacaaacgaagctggcgca
gatgacgctgaggaaggtgtggtggaagacgagctggatgcgacggaactcaatccagag
gatattcttgcacttgctgcgaagaaggcaaggaagaaggatttagctaccgtcgaccat
tcccgcattccgtatgaaccatttcggaaggagttttatatcccacctcccgacgttgcc
gctatgacagacgaagaggctgaactgttgcgacttgagctggacagtatcaagattcgt
ggagtcgagtgcccgaggcctgtcacgaaatggagccactttggtttgcccgccagctgt
cttgatgtcatcaaacggctgaattatacctctccgacgtccattcaagctcaagccatt
cctgcgattatgtccggtcgggatgtcattggtgttgccaagactggttcaggcaagacg
gtcgctttcctactaccactctttcggcatatcaaggatcaacgttcgctggaccaaatg
gaaggtcctatcgcaattataatgacacccactcgcgagctagccgtccagatccatcga
gactgtaagccatttttaaaagtccttaacttacgggctatctgtgcctacggaggctca
ccaattaaggatcaaattgcggacatgaagaaaggcgctgagattatcgtctgtacgccg
ggacgtatgatcgacctgcttaccgctaactctggacgcgtaacgaacctcaaacgtgtc
acgtacctcgttcttgatgaggcggatcggatgtttgatatgggtttcgaaccgcaggtc
atgaagatcatcaacaatattcggccagacaggcagacactcctcttttcggccaccttt
cctagacagatggactccctcgcccggaagatcctcagaaagcccctggagattactgta
ggtgggcggtcagtcgtcgctgcagaaatcgaccagattgtcgaggtgcgagcggaggac
actaaattcaaccgtctccttgaggtccttggccagatgtacaatgacgaccctgaggct
agaaccctcatctttgtcgatcgacaggaagcggcagacaatcttcttcgcgaactgatg
cgcaagggttatctttgcatgtcacttcatggtggcaaagaccaagttgatcgggactcg
acgatagcagattttaaagccggcgtcgttccgatcgtcatcgcaacatctgttgcggcc
agaggattggatgtcaaacagctcaagctcgtcatcaattacgatgccccgaatcatatg
gaagattatgtacatcgtgctgggcggacgggtagagcgggcaataagggcacatgtatc
actttcatcacttcagagcaagatcggtactctgtcgacatctatcgtgcgttgaaggct
agtgaggccaacgttccgcaagaattggaagaattggccaacggtttccttgagaaagtc
aaaacgggcaaggcccaagcggcaggctctggctttggcggcaaaggactcgataggctg
gacaaagagcgcgatgctcgcgagaaggccgaacggaaagcctatggcgagccagaggaa
gagcagaaggcggccgaagaggccacgtctaccaagaaggagacgacggacgacatgacg
ttcggtaacttcaaggtagagatcaagcgcggtccggcgcctgattcgtctaagggacaa
ctgggtgacgttggtcggaaggtcaacccggatgcgacggacttccatgcgatcataccc
atcaacgactaccctcagaaagctcggtggcgggtcaccaacaaagagacaatggtccag
ctcatcgatatgacgggggcgtcggttacgaacaaaggtatctactacgagcaggggaag
gagccaccttcagagggacctccgaaattgcacctgctcatcgagtcgaacgaggaatgg
cgggtcgaacacgctgttcgcgagatcaagcgactgcttattgaggcgtctgccgcagcg
ctgcaggcggagatgcggaaccccacggcaccttccggaagatacagcgttgtttag
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