KEGG   Heterobasidion irregulare: HETIRDRAFT_473506
Entry
HETIRDRAFT_473506 CDS       T03455                                 
Name
(RefSeq) hypothetical protein
  KO
K10754  replication factor C subunit 1
Organism
hir  Heterobasidion irregulare
Pathway
hir03030  DNA replication
hir03410  Base excision repair
hir03420  Nucleotide excision repair
hir03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:hir00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    HETIRDRAFT_473506
   03410 Base excision repair
    HETIRDRAFT_473506
   03420 Nucleotide excision repair
    HETIRDRAFT_473506
   03430 Mismatch repair
    HETIRDRAFT_473506
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hir03032]
    HETIRDRAFT_473506
   03400 DNA repair and recombination proteins [BR:hir03400]
    HETIRDRAFT_473506
DNA replication proteins [BR:hir03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    HETIRDRAFT_473506
DNA repair and recombination proteins [BR:hir03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     HETIRDRAFT_473506
SSDB
Motif
Pfam: RFC1 BRCT AAA Rad17 F-box-like AAA_30 nSTAND3 AAA_5 BRCT_2 RuvB_N
Other DBs
NCBI-GeneID: 20677520
NCBI-ProteinID: XP_009544408
JGI: Hetan2_473506
UniProt: W4KGF2
LinkDB
Position
Unknown
AA seq 1676 aa
MPPIAVRSKGAPKIQGRDIKSFFGAGDSNSKATTAHTKSAHTAQSKAILISDEDDDPKPS
KPTVKISKPISPPAAATLKRKKKILLSSDDEDEEDKHEATPPPKKKAAVASSSASSSKPS
AASVPKPRKPEPKSNGKIKRKKIDEDEYASSPSDDDDEFLVDGVGSEDEKPLKKGPPKGR
PNANTKKTPRKSDANKAKEQPKAKPKTEDAEEGEKPKPKFNWAAAKAAKLAGPVAPGLKV
VPEPAYPDCLAGLAFVFTGELSSFSRDEATDLAKRFGGRVVGQPSSKTSYVVLGENAGPS
KIAALKKHNIPTLSEDEFLNLIATRKGPGNGKGLDEKEKKKQEKELAVIKQGAKELEIRE
KEAANVAGSSKAGSSKMIDTQTQLWTDRYAPQTLREICGNKGQVEKLRQWLHDWPNSLKS
AFKKPGKDGMNIFRGIMISGPPGIGKTTSAHLCAKLEGFTPIELNASDVRSKKLVESSTN
ITNSSLDGWMAGGKLTNAAGVDITDKTCLIMDEVDGMSSGDRGGIGALVALIKKTKIPII
CITNDRTALKMKPLANSTFNMPFRKRTGRRRYSFKGLNYCIQVGRPSSVNTSARADAFRE
KMKVPANVVDQLVNGVQSDIRQVLNMLSTWRLSNSSLDFDQSKMLAKMNEKYSVMTPFNV
TQKILGPYMFSPTARETLGDKMELYFHDYSFVPLFIQENYLKTQPVLVRNESGSAQVLKH
LSLMEQASNSISEGDLVDALIHGPEQHWTLMPVHAVLSTVRPASFLYGGGSGYGGPNAMS
FPQWLGQNSKQNKLSRQLSEVQTRMRLKVSGDKHEIRQSYIPALFPHLVKPLIDEGAVSP
LPTLCTCTVIVDLHLEWLSQKAVDDIIDRMDEYYLSREDWDTIVELGVDDRKDDLILKKI
SAATKSALTKKWVIYSTYEGSVLIGDGRYNTRDHPIVYHRQDLGKVPKKLAGGPAPDLEE
AFDVEEDEPEDDTAKKEQDSDNITNDKLIQRGKGKSNPKAPTKSKSRVSITSSVELGVIS
ALVHSMITVSHLSLLPGEFMAELDFHRTLKWAVQPGLTPRLNSPAASELLLLLYPHRVLR
FLAMTKKNVRLQQLFRKLKAAFTTSSHGCSKRSNSSTEQYLALLPQAPPHDGSIIDSNIP
VITGVPVSNTFHSIPSHPIHNLPVELLELILFHCIPQARTTYFTAYKRGPCSPIWVNVTY
VCHFWRQVALRCPHLWTHITTDLSLPWIITFLDRSRSEPLVVEVDARRITLGVYETHLSA
HTFRMRELYLGCQIFTNGIPEYLDSLRSPAPLLETLIVDMGPCINHVKWSLFSESTPRLC
RLWLHRSINAPSGGLLLHNLRYLKLESSLSMLEETFALLQRAPLLETLRIDLNGGRRGLA
QQTLPSFIRLPNLSLLKVSCSDAYDAFVGLFERLQIPPTVHLKLSSHTYVFSPVFRSNDQ
LVHIFNMIVSHTRTVGKAMDSLTHFQIAITPTYFTLEAEPNAQPTCCICSIPCGHIKSDS
LPVDNAHSKCRHVPLSNVHVLRLSLHQYMPDDSALLQGYRTHGRDIHKWRSILCLMPEIR
SLKVSHDAIPGVLRALTPNASTGDVSNPPVYAKLTELIIGHSVIRCLDGIDSDTDDLQLR
SVALGTLETFLSKRKEAGLELDVLNFSCCKCVGGSVKSLKRYVKRLTWEDFDLTDT
NT seq 5031 nt   +upstreamnt  +downstreamnt
atgcctccgatagcagtacgcagcaagggcgcacctaaaatacaagggcgcgatatcaaa
tcgttctttggtgcaggggacagcaatagcaaagcaacgactgcccatactaaatcagcc
cataccgcacaatcgaaggctatattgatcagtgatgaagatgacgatccaaaaccatcg
aagccaactgtaaaaatctcgaaacccatctcgccaccggctgccgcgaccctgaaacgg
aagaagaagattttgctatctagtgatgacgaagatgaagaggacaagcatgaagccacg
ccacctccgaagaaaaaggctgccgtagcctcctcttccgcctcctcttcgaagccatcc
gcagcctctgtcccgaaaccacgcaagccggagcccaaatcgaatggaaagatcaagagg
aagaaaatcgatgaagacgagtacgcatcatcaccctccgatgatgatgatgagttcctt
gtcgacggtgttgggagtgaagacgagaaacccttgaaaaaaggtcctcctaagggcagg
cctaacgcaaacaccaagaaaactcctcgaaaatctgacgctaacaaggcaaaagagcag
cccaaggcaaagcctaagacagaggatgcggaagagggggagaagcccaaaccaaaattc
aattgggcagcagccaaggcagcgaagctagcagggcctgtcgctcctggattgaaagtt
gtgcccgagcctgcgtatcctgattgtctggctggtcttgccttcgtgttcacaggcgaa
ttgagcagcttctcccgagacgaagcgacagatcttgcgaagcgcttcggcggtcgtgtc
gtgggacagccatcgtcgaagacatcatatgttgtgctgggggagaacgcaggcccgagc
aaaattgcggctctcaagaaacacaatattcccacactatcggaagacgaattcctaaat
ctgatcgctacgcgcaaaggaccaggaaacggaaagggcttggatgagaaggagaaaaag
aaacaggagaaggagctagcagtgatcaagcaaggtgcgaaggagttggagatccgagaa
aaagaggcagccaatgtggcgggatcaagtaaagctggaagttcgaagatgattgatact
cagacgcagctttggacggatcgctatgctccccaaacactcagagaaatttgcggaaat
aaaggccaggttgagaaacttcggcagtggttgcatgattggccaaacagtctaaaatcg
gctttcaaaaagcctggtaaggatggtatgaacatattccgcggtatcatgatctccggc
ccgcctgggattggcaaaacaacaagcgcccatctctgcgcgaaacttgagggatttacg
cccatcgagctcaacgcgagtgatgtgcggagcaagaagctcgtcgagagcagtaccaac
atcacgaacagttctctagacggctggatggctggtggaaaattaactaatgctgccggc
gttgatatcactgacaagacctgtctcatcatggacgaagtcgatggcatgtcttctggc
gatcgagggggtatcggtgcgctcgtggcactgatcaagaaaacgaagattcctatcatt
tgtataacgaatgatcgcaccgctctgaagatgaagcctctcgctaattcaacgttcaac
atgccattcaggaagcgaaccggacgccgccgctattcgttcaagggtcttaactattgc
atacaagtaggtcggccaagtagtgtcaacacgtcagcgagggctgacgcgttcagggaa
aaaatgaaggtaccagctaacgttgttgaccagctggtcaacggcgtgcaatcagacatc
cgacaggtcctcaacatgctttcaacgtggagattatcgaacagttcgctggacttcgat
cagagcaagatgctagccaagatgaacgagaagtacagcgtgatgacgccgttcaacgtg
actcagaagattttggggccatatatgttctcgcctacggcgcgagaaacattgggcgat
aaaatggaactctactttcatgactattcctttgtaccgctgttcatccaggaaaattac
ttgaaaacacaacctgtgcttgtccggaacgagagtggatcagcgcaagtcctgaaacac
ttgtcgcttatggaacaagcctcgaattcaatatccgaaggagatcttgtcgatgctctg
attcatggtcctgagcaacattggactctgatgcctgtacacgccgtcttgtcgacagtc
cgcccggcgtccttcctttacggtgggggttctggctatggtgggccgaacgccatgtca
ttcccacagtggcttggtcaaaattcgaaacagaacaagctaagcaggcagctaagcgag
gttcagacgcgcatgcgactgaaagtatccggagataagcatgagatcaggcagtcgtac
attccggccctgttcccacatctagtgaaacctttgatcgacgagggagccgtgagtcct
ttgcctacgctatgcacgtgtactgtaatcgtcgacttacacctggaatggctctctcag
aaagctgtcgatgacatcatcgatcgcatggacgaatattatctgtctcgggaagactgg
gacaccatcgtcgagcttggggttgatgaccggaaggatgatttgatattgaaaaagatc
tctgcagcaaccaaatcggcattgacgaagaagtgggtgatttattctacgtacgagggg
agtgtactaatcggcgacggcaggtacaacacgagggaccatccgatcgtgtatcacagg
caagaccttggcaaggtgccgaagaagcttgcaggaggaccagcgcctgatctggaggag
gcattcgatgttgaggaagacgaacccgaggacgacaccgctaagaaggagcaagactca
gacaacataacgaatgacaagctcatacaacgaggcaaaggcaagtccaatccaaaggcc
cctacgaagagcaagagtcgcgtgtccattacctcctcagtggaactgggagtaatctca
gcgctagtgcattccatgatcacagttagccatttatctcttctgcctggcgagttcatg
gcagaattggactttcatcggactttaaaatgggctgttcaacctggtttaactccgagg
ttgaactctccggctgccagcgagctactccttctcttataccctcacagggttttgcga
ttcttggctatgacgaagaaaaatgtgaggctgcagcagctattccgaaaactgaaagcg
gcttttacaacctcgtcgcatggttgcagcaaacgttccaattcctcgaccgagcaatat
ctagccctgttgcctcaagctccccctcacgatggctcaattattgacagcaatattcca
gtcattacaggtgtcccggtgtctaacacattccattccattccttcacaccccattcac
aatttgcctgtcgagctgctcgagctgatcttgttccattgcatcccacaagctcggact
acatattttaccgcatacaagcgtggtccttgctctccgatatgggtcaatgttacctat
gtctgtcacttctggcggcaagtcgcccttcgctgtcctcacctctggacacacatcacc
acggacttaagcctaccgtggataatcacgtttttggatcgctcaaggtcagagcctttg
gttgttgaggttgatgcacgccgtatcactctgggtgtctacgaaactcatctttccgcc
cacacttttcggatgagagagctctatttaggttgtcaaatctttaccaatgggattcct
gaatatctcgattcgttgaggagtcccgctcccctcttggagactctcatcgttgatatg
ggcccttgcataaatcacgtgaaatggagtctattttcagagtctacccctcgattatgt
cgattatggctgcatcgcagcataaatgctccatccggtggacttctcctccacaacctc
cgttacctcaagctggaaagctctctatccatgctcgaggagacctttgcattgttgcaa
cgtgcacctctcctagaaactctccgcatcgacctgaatggcggacgtcgcggtctagct
caacaaaccctacccagctttattcgacttccgaacctgtcccttctgaaagtatcatgc
tccgatgcgtatgatgcctttgttggcctattcgagcgattgcaaattcctccgacagtt
catctcaaactctcctctcacacatacgttttctcgccagtgtttcgatccaatgaccag
ctggtgcatatcttcaacatgatagttagccatacccgcacggttggcaaagcaatggac
tctttgacgcacttccaaatcgcaatcacaccaacttatttcaccctcgaagccgaaccg
aacgctcaaccgacttgctgcatttgtagcattccttgcgggcacatcaaatccgactca
ttgcccgtggataacgcgcattcgaaatgcagacatgtacccttatcaaatgtacatgtg
ctgcgcttatccttgcatcaatacatgccggatgactctgctcttcttcaagggtatcgt
acacacggacgcgatatccataaatggcggtctatcctctgtctcatgccagagatccga
agtctcaaggtgtcgcacgacgctatccccggggttctacgagcgctcacacccaacgcg
agtactggcgatgtctcaaatccacccgtgtatgccaaattaacggagcttatcattggt
cacagtgtcatcagatgcctggatggcattgatagtgacactgatgatcttcagttacgc
tcagtcgccctcgggacgttggaaacatttctatcgaagaggaaggaggctggattggaa
ttagatgtcttgaatttcagctgctgtaagtgcgttgggggcagtgtgaagtctttgaag
cggtacgtgaagaggttgacttgggaggactttgatttgacagatacttga

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