Heterobasidion irregulare: HETIRDRAFT_475056
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Entry
HETIRDRAFT_475056 CDS
T03455
Name
(RefSeq) hypothetical protein
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
hir
Heterobasidion irregulare
Brite
KEGG Orthology (KO) [BR:
hir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hir03000
]
HETIRDRAFT_475056
03036 Chromosome and associated proteins [BR:
hir03036
]
HETIRDRAFT_475056
Transcription factors [BR:
hir03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
HETIRDRAFT_475056
Chromosome and associated proteins [BR:
hir03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
HETIRDRAFT_475056
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH1_SSRP1-like
POB3_N
Rttp106-like_middle
SSrecog
Motif
Other DBs
NCBI-GeneID:
20677601
NCBI-ProteinID:
XP_009546252
JGI:
Hetan2_475056
UniProt:
W4K705
LinkDB
All DBs
Position
Unknown
AA seq
512 aa
AA seq
DB search
MTTQFDRIYHGLFQKPGKFRVANSGMAWREEEKDEVTSMPNSDIKWAQWLRVARGFQLRV
GLKDRRRETFDGFEREDHDKLASILKQHFGVTLEPQEVSVKGWNWGVTDFRGSDLAFLVS
NKTSFELPLQHVANSNIAGRTEVSLEFTNPASSSKKPVKGAPDEMVEIRFFVPGTSHRVR
GSDAGSQKSDNEEEDGEELSAAQAFHDTVKEKAELGQVAGDMILSFEEVLVLTPRGRYDV
DMFPEFLRLRGKTYDYKIVYTSISRLFLLPKDDLHVLFILALSTPIRQGQTRYQYLVMQF
SREEEITAELNMKDEEIAKHDRLKKHYEDPTFEVVSSVFRGLSEKKIISAGSFQSRNGHP
GIKANLKAIQGDLFMLEKYIFFVSKQPVLIELSDIHQVVFSRVGSAMGAAAARTFDLKIV
TKSGPEYTFTSINKEEHEPTEKYLKDKKVRVKNEMVPDGDILLAGGDSDEEMQSVASDDD
EEVHVKRTGDDDDDSEEGELYVSLAEIRQQPC
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgactacacaattcgacagaatctaccatggtctcttccaaaagcccggcaaatttcgt
gtggccaacagcgggatggcttggagagaggaggaaaaggacgaggtgacttcgatgcca
aattcagacatcaaatgggcacagtggctgcgcgttgcgagaggattccagctgagagtc
ggtcttaaggaccgccgaagggaaacattcgacggtttcgagcgtgaagatcatgacaaa
cttgctagtatcctcaagcaacactttggcgtcactcttgaaccacaggaggtctctgtc
aagggatggaactggggtgtgacagatttccgaggcagtgaccttgcattccttgtatct
aacaaaacatcattcgaattgccactgcaacatgtggcaaactcaaacattgctgggcga
accgaagtttcactcgaatttactaatccagccagctcgagcaagaagccagttaagggc
gctcccgatgagatggttgagatacgctttttcgttccaggtacgagtcatcgtgtccga
ggatcagatgcagggtcgcagaagtcggacaatgaggaggaagacggggaggaattgagt
gcggcgcaggccttccatgatactgtgaaggagaaggcagagcttgggcaagtagcaggc
gatatgattctcagcttcgaggaggtcttagtgctcacaccaagaggtcgatacgatgtc
gacatgttccccgaattcctgcgccttcgtggtaagacatatgattacaagatcgtctac
accagcatttcaagactattcctactaccgaaggatgatttgcatgtccttttcatcttg
gctctgagcactccgatccgacagggtcagactcgctaccaatatcttgtcatgcagttc
agtcgagaagaagaaattacagctgaattgaacatgaaagatgaggaaatcgcgaagcat
gatcgactcaagaaacactacgaagatcctactttcgaggtcgtgtccagtgttttccgt
ggactctctgagaagaagatcatcagcgctggtagctttcaaagtcgcaatggacaccca
ggcatcaaagccaacttgaaggctattcaaggcgacctcttcatgctcgaaaaatacatc
ttctttgtatcgaaacaaccagttctcatcgagctttccgatatccatcaagtcgtcttt
tcccgtgttggttcagccatgggcgctgcggccgcgcgaacattcgacttgaagatcgtt
acaaagagtggaccagagtatacgttcacatcaatcaacaaggaggagcacgagcccacg
gaaaaatacttgaaggacaaaaaagtgcgcgtcaaaaatgaaatggtgccagacggagat
atcctccttgctggaggtgattcggacgaggagatgcagagcgttgccagtgatgacgat
gaggaggtacatgtgaaacgtactggcgatgacgatgacgatagtgaggaaggtgagcta
tatgtttcactagccgagattcggcagcaaccctgttga
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