Heterobasidion irregulare: HETIRDRAFT_475551
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Entry
HETIRDRAFT_475551 CDS
T03455
Name
(RefSeq) hypothetical protein
KO
K14569
ribosome biogenesis protein BMS1
Organism
hir
Heterobasidion irregulare
Pathway
hir03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
hir00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
HETIRDRAFT_475551
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hir03009
]
HETIRDRAFT_475551
Ribosome biogenesis [BR:
hir03009
]
Eukaryotic type
90S particles
GTPase
HETIRDRAFT_475551
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIBIOP_C
AARP2CN
AAA_16
AAA_22
ABC_tran
MMR_HSR1
AAA
nSTAND3
RNA_helicase
AAA_28
AAA_25
AAA_33
RsgA_GTPase
NB-ARC
AAA_5
NTPase_1
AAA_14
NACHT
AAA_18
Rad17
AAA_24
AAA_19
NPHP3_N
ATP_bind_1
Motif
Other DBs
NCBI-GeneID:
20677633
NCBI-ProteinID:
XP_009546616
JGI:
Hetan2_475551
UniProt:
W4K881
LinkDB
All DBs
Position
Unknown
AA seq
1097 aa
AA seq
DB search
MEDRPHKTHRPPQSGQKADKKGKGKEKQHGFNEKAFAPRSGRRAERQGRRTAEKDQTRLH
VPLVDRTPDDLPPPVIVAIVGPPGVGKSTLVKSLVRRYTKQTLSEIRGPVTVVSGKKRRL
TFIECNNDLNSMIDIGKIADLETFEFLNVLQAHGFPKVIGVLTHLDLIKKAATLRDTKKA
LKKRFWTEIYQGAKLFYLSGVLNGRYPDTEILNLSRFVSVMKFRPLVFRNAHPYLLADRF
EDLTPREDVRLSKGKCDRTVTMYGYLRGTNLRAGTKVHIPGVGDLDMKGVTMLGDPCPLP
DADSEKRRKLSEKKKLLVHAPMSDVGGVMYDKDAVWVNVPGSFTRGNTDVPQGEGEQMVM
DLQDVDETLEDVVARSHIRLLGSSSRNLIVDPSSSRSVEEVDDDDDDDDDDDDDDDDDDG
PDGGESEDESEGEDAAGTEHGDSDLGEEEDDEGAGGSRVRFAEDPADADIPSEEEDEADV
EMDEDEDIPKWKQNLTERAATSFELTSRRKKREDWTKLIYSSALTPTQILHEGSHTSIED
GEGGDEDDFFQVKKSTDTVEEVFDMTKDPTDPEELKEWENIEMLDSIRHLFITSHDQGEK
DGPEGGEEHDDAEDGSEEEGDRVDGEMPLDSESARAASLAAKKEALKRKFDEQYDDPETS
KQDFYDEKKDEIARQQTLNREEFQDVDAETRALVEGYRPGSYVRIEMANVPCEMVEHFDP
RRPLIIGGLLPAEERFGFIQVRIKRHRWYARTLKTNDPLIFSLGWRRFQSIPIYSLDDHS
IRMRMLKYTPEHMHCYATFYGPVALPNTGFCAFNSLGPDSAVFRISATGVVLDIDRSTKI
VKKLKLTGAPYKIFKNTAFVKDMFTSALEVAKFEGANIRTVSGIRGQVKKALPKPDGAFR
ATFEDKVLMSDLIFLRAWYSIQPRKFYNPVTSLLLSNDSGWAGMRLTGQVRREQGLNAPQ
PVNSTYKSITRPGRRFNTLKVPRKLQASLPYASKPKLMKPQRKETYLQKRAVVLEPEEKK
AIAVMQQIRAIRKDQVARRREKQNVRKEDRRKKLEKDEARKSEKKREERKEHMRIAGIKS
KRETEREEGGSRKRRKT
NT seq
3294 nt
NT seq
+upstream
nt +downstream
nt
atggaagacagaccgcataaaacgcaccggccccctcagtctggtcaaaaggcggacaag
aagggaaagggcaaggaaaagcagcatggcttcaatgagaaggcatttgcacccaggtcc
ggtcgcagagcagaacgtcaaggacggaggacagccgaaaaagatcaaacccgtctccat
gttccccttgtcgaccgcacccccgacgacctgccgccccccgtcatcgtggccatcgta
ggcccgcctggtgtcggcaaaagcaccttggtcaagagcctagttcgccggtacaccaag
caaacactgtctgaaatacgaggacctgtcacagttgtcagcggtaaaaagagacgtctc
accttcatagagtgcaacaacgacctcaactctatgatcgacatcggtaagattgctgac
cttgaaaccttcgaattcctcaacgttctccaagcccacggcttccccaaagttatcggc
gttctcacccatctagacctcataaaaaaagcagcgactctccgagacaccaaaaaggcc
ttaaaaaaacgcttctggacggaaatctaccagggcgctaaattattctatctatccggc
gtgctaaacggccgatatccagacaccgaaatcctcaatctctcccgtttcgtgagcgtc
atgaagttccgccctctcgtcttccgaaatgcccacccatatctcctcgccgaccgcttc
gaagatcttactcctcgcgaggatgtccgactctccaagggaaaatgcgatcgcactgtc
acgatgtacgggtatttgaggggcacaaacttgcgcgcagggacgaaggtgcatattcca
ggtgttggtgatcttgatatgaagggagtgacaatgctgggggatccgtgcccgctccca
gacgcagattcggagaagaggaggaagctgagcgagaagaagaagctattggttcatgcg
ccaatgagcgatgtgggcggggtcatgtacgataaggatgcggtttgggtaaacgtacct
ggcagtttcacgagaggaaatactgatgttccacagggggagggggagcagatggtaatg
gaccttcaagatgtagatgagacgctcgaagacgttgttgctcggagccatattcggctt
cttggttcctcttcccggaatttgattgtagatccttcatcgagtcgttctgtggaagaa
gtcgacgatgacgatgacgatgacgatgacgatgacgacgacgacgacgacgacgacggc
cccgacggcggtgagagtgaagatgagagcgagggcgaggatgcagcagggactgagcat
ggcgattcggacttaggtgaagaagaagatgacgagggtgctggtgggagccgagttcgg
tttgctgaagatccagcggacgctgatattccaagcgaggaagaagatgaggccgatgta
gagatggacgaggacgaagacatcccgaagtggaagcagaacctaacggagcgcgcggca
acgtctttcgagctaacatcgcggcggaagaagcgtgaggactggacaaaactgatctac
tcgagcgccttgacgcccacacaaatattacatgagggctcacacacatcaatagaggat
ggtgagggtggagacgaggacgacttctttcaggtgaagaagagcacggatacagtggag
gaggtattcgatatgaccaaggacccgactgatcccgaggagctcaaggaatgggagaac
atcgagatgttggattcgatacgacatctatttatcacaagccacgatcaaggcgagaaa
gatggacctgagggcggagaagagcacgatgatgcggaagatggcagcgaagaggagggc
gatagagttgatggagagatgcctctggactcagagtcagctcgcgcagcttctttagct
gccaagaaggaggctctcaaacggaagttcgacgagcaatacgacgatccagagacgtcg
aagcaggacttctacgatgagaagaaggatgaaattgctcgtcaacaaacgctcaatcgg
gaagagttccaagacgttgacgcggaaacgcgtgcccttgtcgagggttaccgtcctggg
tcgtacgtccgaatcgaaatggcgaatgtcccgtgcgagatggtcgagcactttgatcct
cggaggccgctcatcatcggtgggctactccctgctgaggagcgttttgggttcatccag
gttcgcatcaagcgtcatcgatggtatgcgcgcacgctcaagaccaatgatccgctcatc
ttcagcctgggatggcgccggttccagtcaatccctatatattccttggacgaccattct
atccggatgcgcatgctcaagtacacaccagagcacatgcattgctatgccacattttat
ggccccgttgcgctccctaacaccggcttctgtgcattcaactccctgggcccagactcg
gctgtattccggatttctgccacaggagtcgttttggatattgaccgctcgacgaagata
gtaaagaaactcaaacttactggtgcaccatacaagatcttcaagaacaccgcgttcgtg
aaggacatgttcacctccgctctcgaggtcgccaagttcgagggtgcaaatattagaact
gtgtcgggcattcgcggacaagttaagaaagccctaccgaaacctgatggggcattccga
gcgacgttcgaggataaggtcctaatgagtgatctaatcttccttcgtgcttggtattca
attcaaccacgcaagttctataatcctgtcacgtcgttgctcttatcgaacgactcaggc
tgggctggcatgcgtctgactggccaggtacggcgggagcagggcctcaatgctccgcag
ccagtaaattctacatataagtcaatcacacgaccagggcggcgtttcaacacactcaag
gttcctcgcaaactccaggcgtcccttccgtatgcttcaaagccgaagctcatgaaacct
cagcggaaagagacgtacctccagaagcgcgcagtcgtgctcgagcccgaagagaagaaa
gcgatcgcggtgatgcagcagatccgagcgattcgcaaggatcaagtggcgcggaggaga
gagaagcagaacgtgaggaaagaggacaggcggaagaagcttgagaaggacgaggcgagg
aagagcgagaagaagagagaggaaaggaaagaacacatgcggatcgcggggatcaagagt
aaacgagaaacagagagggaggagggagggagtaggaagcgaaggaagacatga
DBGET
integrated database retrieval system
