Heterobasidion irregulare: HETIRDRAFT_475976
Help
Entry
HETIRDRAFT_475976 CDS
T03455
Name
(RefSeq) hypothetical protein
Organism
hir
Heterobasidion irregulare
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RdRP
AAA_11
AAA_12
AAA_19
AAA_30
UvrD-helicase
ResIII
DEAD
SLFN-g3_helicase
Rad17
AAA_16
NAT10_TcmA_helicase
AAA_7
nSTAND_NTPase5
AAA_22
nSTAND3
AAA
NPHP3_N
PhoH
AAA_18
RNA_helicase
AAA_5
ATPase_2
UvrD_C_2
DO-GTPase1
AAA_25
Motif
Other DBs
NCBI-GeneID:
20677655
NCBI-ProteinID:
XP_009547140
JGI:
Hetan2_475976
UniProt:
W4K5S0
LinkDB
All DBs
Position
Unknown
AA seq
1672 aa
AA seq
DB search
MASRFTLRDGVSPDDASWSFTNVPSNLLKSPTVAHARAPRGKLVIFAPEKITLELAEFPS
NRILYNDDPSEFVLASFEKLRFPDTKPSVAAEYKIRLFKAGLFLNGAQYRFYGHSNSQLR
GRSCFLRRANNDKELDDRLYAMGDFQKIMNVAKRAKRIGLLFSGAQVDYILDPKYVGDID
DIKTGDENFSDGCGLISERLSMQVSRAKKIIHQGKPYTPCVFQIRFGVVMLHPDLDKARK
NFVEFRKSMKKFNATVDHIFSVVNYSAPYTFGRLNNEIVILLSSLGISNQALLAKQQEYF
DWVEKASSDPIAGFEFLSGMGRQISAERVLLEGIDSPNIAKEIKSLQKAEVASVHKDGDA
NKERVRMVVRKSRRLFGVCDPFRVLREGQVHVRITVSRLGSSTLKGLDVIVVRNPCLHPG
DILKLRAVDHPQLAHLVDCVVFPSVGKRAAPSMSSGGDLDGDEYFVCWDPSLVPSKVSES
YTYPPNREWVNPKVTREDLARHFAAYNNSGMANAAKYHNRWARYADNIALSKECQELNAL
YSQAVDGARISIPPRLTKAPEPKEDFVLTVLFSAVKQFSEHFLQKPENMTPSQLSRSDAE
ELIHRILSAEETTLSEYKLVNLARSIARKHEIDFRQYISHINFGALLAHEKYELAAYLGS
TPANEPYIWNSLLRSDIVTASELADKKLGGLLRLQRLYSSKLQGLYAFFEYMERSFREFT
RKIVIMKIDGRFSVAIFLRGDIPWDDDVPVNGQNVVVASFMKDTAASVPVYKPCTDGFRL
HCSNGNFQLFNQERANTFIFVTRPPVNSGEEIKTSIALQQISARVQRQVGRINRTAVVSI
EIHVVSNRDRVATQLFDMRFEHVETEEFIRRLAHENSTFQPNTLQNADWESLPNEHRMVF
YESEFKVKEYLSGQPLDALDECAEFAWRYHADHQLFWIFDAIISPVPLNLPYVENWVDRE
PLLVFSVLKKFVPSETGFLHEHTSSLGRLITKQIIRSANIVGIASLVALEKIKGTIATLN
IVHYLELLELAAMSVRSPELVQEILLVLHECREITRSTSASLAHIHQHALAIACDRAEEA
GDECPCDENGRPRKQHIAPALVPLFPVEGKLSEAVAHIRVDAPSAIRLHSHVRLRAASKP
EKGHVEPSVLDAIVLEANAGEVKLLLIHTPPPEYVQMQWYIYNAGSVATFKAMMSAIHRL
ATEGAECCRFHHIITAPKGPPELSSQSQEPEDVASEASVQEVSSGDEDGGLNPSQRAAVL
SSDATQLSLIWGPPGTGKTTVVVQILKRLIKNSTENSRILMTASTHNAVDNVLERFLRIN
EKEQIIAPEQILRVATDSFKVNQALRSYTVESRVGGEINRDSRRREKAEKLVKGAHIVFT
TCAGAGLGVLRSVDFDIVLIDEASQVTEAVALIPLVKGCKKAILVGDHVQLRPMVRPLGR
ALQYDVSLFERLYTGNSMNGMSRTMLDVQYRFPEGLACFPSTEFYNGKLKTGVRDAHELL
KNLLRSQFPWPQVAGKTKPAVFIPCSTEEDYGGRSKSNEGQAQLVKHIVKLLTTSHDGDN
DGHLSDAPSIVILSPYTKQTKLLKNTLPPSTPSFTIDSFQGRESDIIIFSTVRCNAGGEV
GFVEDARRLNVAWTRARLALIVVGDRRTMTGSVGLWKRAIEACVEVQIPMSD
NT seq
5019 nt
NT seq
+upstream
nt +downstream
nt
atggcatcccgcttcactctgcgcgatggtgtctctcctgacgacgcttcttggtccttc
accaacgtaccttccaaccttttgaagtctcccactgtggctcatgcaagagcaccaagg
ggaaagctcgttatcttcgctcccgaaaaaataactctggaacttgctgagttcccgagc
aatcgtatactctataacgatgatccttcggaattcgtgctcgcgtcttttgaaaagctc
aggtttccagatacaaaaccctctgttgctgcagagtacaaaatacgactcttcaaagca
ggtctcttcctgaatggggctcagtaccggttctacggccacagtaacagccagctccga
ggtcgtagctgcttcttgcggagagcaaacaatgacaaggaattagatgaccgtttgtat
gcaatgggcgattttcagaaaatcatgaacgtcgcaaagcgtgccaagcgcatcggtctc
ttattttccggagctcaggtcgattacattctagatcccaaatacgttggagacatcgac
gatatcaagactggagatgagaacttttccgatggctgtggtctgatctctgaaagatta
agtatgcaagtaagcagggcaaaaaaaatcatccatcaaggcaagccatatacgccatgc
gtatttcaaatcaggtttggcgtggtcatgctgcatcctgatctggacaaagcaagaaag
aactttgtcgaatttaggaagagtatgaagaagttcaatgcaacagttgatcatatattc
tctgtcgtcaattattctgcgccatacacttttggcagactcaataacgagatcgttatt
ctcctttccagcctaggcatctcgaaccaagctttattggcgaagcaacaggagtacttc
gattgggttgaaaaagcgtcttctgaccccatagccggtttcgagtttttgtctggtatg
gggaggcagatttcggcggagcgagtccttcttgagggaatcgattctcctaatatagcc
aaggagatcaagtctctccagaaagccgaggttgcctctgttcacaaggacggagatgcc
aacaaggagagagtccgaatggttgtacgcaagtctcgtcgcctatttggcgtctgcgac
cctttccgagtccttcgtgaaggacaggttcatgtcaggatcactgtttctcggcttgga
tcatctacgttgaaaggccttgatgtcatcgtcgttcgaaatccttgtttacatcctggt
gatatactcaaactcagggcagtcgatcatcctcagctcgcgcacctagtcgactgtgtt
gtatttccatcagtagggaaaagagcggcaccctctatgagttcgggcggcgatcttgat
ggtgatgaatattttgtctgttgggatccaagtttggtgccctcgaaagtttccgagtca
tacacgtatccacctaatagggaatgggtgaacccaaaggtcactcgtgaagaccttgcc
aggcattttgcagcatataataactccggaatggctaatgctgcgaaatatcataaccga
tgggctcgttacgccgataatatcgcgttgagcaaggaatgtcaagagttaaacgcactc
tactcgcaggctgttgatggcgcccgaatctcgataccgcctcgacttaccaaggcccct
gaacctaaggaagatttcgtcttaactgttctcttctctgcggtaaagcagttcagcgag
catttccttcagaaacccgaaaacatgacgccgtcccaactcagccgcagcgatgctgag
gaattgattcaccgaattttatctgccgaagaaacaacgctctctgagtataagctcgtc
aacttggcccgctcgattgctcgcaagcacgagatcgatttccgccaatatatttctcat
atcaatttcggcgcattgcttgcacatgagaaatacgaacttgccgcatatctgggctcc
acacccgcgaatgagccatatatatggaacagtctcctgcggtctgacatagtgacagca
tccgaattggcggacaagaagctcggaggtttgctgcggcttcagcgtctgtattcgtca
aaattacaaggcttgtatgcattcttcgaatatatggagcgttcctttagggagtttaca
aggaaaatcgttatcatgaagattgacggacgattctcggtcgcaatctttctacgagga
gacattccgtgggatgatgatgtgcctgtgaatggccagaatgttgtggtcgcatccttc
atgaaggacaccgctgccagtgtccccgtatataagccctgcacagacggcttccgcctt
cattgcagcaacggaaattttcaattattcaaccaagagcgcgctaatacgtttatcttc
gtaactcggccgccagtcaattctggcgaggagatcaaaacaagcattgctttgcaacaa
atttcagcacgagtgcagcgtcaagttgggcgaatcaataggaccgctgttgtttccatt
gagatacacgtagtatccaatcgcgatcgagtcgccacccaactttttgacatgcgtttt
gaacacgtggagaccgaagaatttatcagacgactcgcccacgagaacagtacatttcag
ccgaatacgctgcaaaacgctgattgggagtcccttccgaacgagcatcgaatggttttc
tacgagtcagagtttaaggtcaaggagtatctttccgggcaacctctggatgccttggac
gaatgtgctgaattcgcctggagataccacgctgatcaccagctgttctggatcttcgat
gccattatctctccagtccctctcaatctcccttatgtcgagaactgggtggatcgagag
cctctccttgtcttctctgtgctgaaaaagttcgttccatctgagacgggcttccttcat
gagcatacctcttcgcttggacggctcattacaaaacagatcatccgctctgcgaacatt
gtcggcatagcgtccctggttgcactggaaaagatcaaaggcacgatcgctacactcaat
attgtacattacctcgagctcctcgagcttgccgctatgtctgtccgttcaccagagctt
gtacaggaaatcctcctcgttctacacgaatgccgggagataactcggagcacctcagca
tcactagctcatattcatcagcacgcactggctattgcatgtgaccgtgctgaagaagct
ggagacgaatgtccctgcgatgagaatgggaggccgagaaagcagcacatagcgcctgcg
ctagtacctctttttccagtcgaaggaaagttgtcggaggccgtcgctcacatccgcgtt
gatgcaccatctgctattcgattacattctcatgttcgccttcgtgctgcctctaaaccc
gagaaaggacacgttgaaccgtctgtccttgacgctattgtgctcgaagctaacgcagga
gaagtcaaacttttattaatccacacacctccgccagagtacgtgcagatgcagtggtat
atatataatgcaggcagcgtcgcaaccttcaaagccatgatgagtgccatccacaggctt
gctacggagggcgctgagtgctgccgttttcaccatattattactgcacctaaagggccg
cccgaattgagtagccaaagccaagagcctgaggacgtcgcctctgaagctagtgttcag
gaagtttcatcgggcgacgaggacggtgggcttaatccaagtcagagggcggcagttctg
tcgagcgatgccacccaactgtcattgatctgggggcctcctggcacaggcaagactaca
gtagtcgttcaaatcttgaaacgcctgatcaagaattcaacggagaattctaggatattg
atgactgcttctactcacaatgccgtggataacgtcctggaaaggtttttaagaatcaat
gaaaaggagcagatcatagctccagaacaaatattgcgtgtagctaccgacagtttcaaa
gtcaatcaggcgctacgaagttacacggttgaaagccgtgtgggaggggaaatcaaccgc
gattctaggaggcgcgaaaaagcggagaagttggtaaaaggagcacatatcgtctttaca
acctgcgcaggtgctgggctaggtgttctgcgatcagttgacttcgacatcgtcctcatc
gatgaagcctcccaagttaccgaggcggtagccctcattcctttggtcaaaggctgtaag
aaagcaatactcgtgggagatcacgttcaactgaggcctatggtgcggcctcttggtcga
gctctccaatatgacgtgtccctattcgaacgtctgtacacaggcaactcgatgaacgga
atgtcacgcacgatgctggatgtccagtaccggttccccgaaggtctagcttgtttccct
tcgaccgagttttacaacggcaagctgaagacaggtgtccgagatgcccacgagctgctg
aaaaatcttcttcgatcacagtttccatggcctcaggtagctggaaagacgaagccagcc
gtattcattccttgttccacggaagaagactacggcggaaggtcgaagagcaatgagggt
caagcgcaactcgtcaaacatatagtaaagttgctcactaccagccacgatggggataat
gacgggcatttatccgacgctcctagcattgtcattctgtctccttacaccaagcagaca
aaattgttgaaaaacacgctacctccttccacaccaagctttacaattgattcatttcaa
ggccgggagagcgacatcatcatcttctcgaccgtgcggtgcaatgccggtggtgaggta
ggatttgtcgaggatgcgcgcaggcttaacgtcgcctggacacgtgcgaggctggcgttg
attgtggtaggagatcggagaaccatgacaggtagtgtggggctatggaagagggcgatt
gaagcgtgcgttgaggttcagatacctatgtcagattga
DBGET
integrated database retrieval system