Heterobasidion irregulare: HETIRDRAFT_477892
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Entry
HETIRDRAFT_477892 CDS
T03455
Name
(RefSeq) hypothetical protein
KO
K10295
F-box protein 9
Organism
hir
Heterobasidion irregulare
Brite
KEGG Orthology (KO) [BR:
hir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hir04121
]
HETIRDRAFT_477892
Ubiquitin system [BR:
hir04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
HETIRDRAFT_477892
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FBO_C
F-box-like
F-box
MIT
F-box_4
Hydant_A_C
Motif
Other DBs
NCBI-GeneID:
20677784
NCBI-ProteinID:
XP_009548957
JGI:
Hetan2_477892
UniProt:
W4JYK9
LinkDB
All DBs
Position
Unknown
AA seq
461 aa
AA seq
DB search
MSHESTITDESEELTRFREQWKSEVRQKKQPAPAPAPAPVPPSTSSPASTSIIAPPPPTD
APPPLSNVVPERPFNVFGVARLSTTTPAPTAFVSNVSIRARNNAINVYRQAVRCEQASQL
DEALRLYRIAFRMDSDVDKAYHKAEQQSLAAATAAGERPPGHRKTSSADSAVERVTQSMK
GLDLPSAHVHHAHHEAHVTGLLAKMVKDFPSVLLFEPEDETESTPLNSLPDEVLIHILGF
LNTSALERFGSTCRKARVLTLEPSFWRRFVETTYKPPQIADDEDLDAIVDAFDADYRRVF
IERPRVRLDGVYIAVCHYIRQGVSENAWVNMSHLITYHRYLRFFSNGQVISLLANEEFEP
QQIIPIFRPGLRMKGFYIGTWTLRGTTVFITNLYDPANASARYSFQMTLALRSRPLGRWN
KLEFIGYDSVDVEGEASPLALKNERPFWFSKVRSYAAAVVE
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgtctcacgagagcacgataacagatgaatcggaagagttaactcgcttccgtgagcag
tggaaatcggaggtcaggcagaagaaacagcctgctcctgctcctgctcctgctcctgtg
ccgccttccacgtcgagcccggcctccacgtcgatcatcgcgcccccaccacccaccgat
gctcctccgcctctgtcaaacgttgtccctgagagacccttcaacgtttttggtgtcgcc
agactgtctaccacgacccctgctcctaccgccttcgtgtccaatgtctccattcgtgcg
cgaaacaacgctatcaacgtctatcgacaggcggtgcgatgcgagcaggccagccagctt
gacgaagccctccgcctctaccgcatcgcttttcgcatggattcggacgtcgacaaggca
tatcataaagccgagcagcaatctctcgccgccgccactgctgcaggcgagcggcctcct
gggcatcggaagacgagctcagctgactctgcggttgagcgggtcacccagagtatgaaa
ggcttggatctcccatccgcgcatgtgcaccatgcacaccatgaggctcatgtgacgggg
ctcctggcgaagatggtgaaggactttccgagtgtcttgttgttcgagccggaagacgaa
acagagagcacaccgctcaactctctgcctgacgaggtccttatccacatccttggcttt
ctcaacacgtccgccctcgagcgcttcgggtccacttgccgcaaggcccgcgtgctgacc
ctcgagccgtcgttttggaggcgcttcgtggagacgacgtacaagccgccacagatagcg
gatgacgaggatttggacgcgatcgtagacgccttcgatgccgattatagacgtgtattc
atagaacggccccgagtccggttggatggggtctacattgcagtatgccattacattcga
cagggcgtgagcgagaacgcctgggttaatatgagccatctaatcacataccatcgttat
cttcgatttttctcaaacggtcaagtgatatcacttctcgccaacgaggagtttgagcca
caacagatcatccctatcttcaggcccggtcttcgaatgaagggcttctacatcggcacg
tggacgctccgagggacgacggtgttcatcacgaacctgtacgaccccgcaaacgcgagc
gcgcgttactcgttccagatgacgctcgccctgcgctcgcggccactcgggcggtggaac
aagctcgagttcattggatacgactcggtcgacgtggagggggaggcgtcgccgctggct
ttgaagaacgagcgaccgttctggttctccaaggtcaggtcgtacgccgccgcggtggtg
gagtag
DBGET
integrated database retrieval system
