Heterobasidion irregulare: HETIRDRAFT_480925
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Entry
HETIRDRAFT_480925 CDS
T03455
Name
(RefSeq) hypothetical protein
KO
K12859
U5 snRNP protein, DIM1 family
Organism
hir
Heterobasidion irregulare
Pathway
hir03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hir00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
HETIRDRAFT_480925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hir03041
]
HETIRDRAFT_480925
Spliceosome [BR:
hir03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
HETIRDRAFT_480925
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DIM1
Thioredoxin
Motif
Other DBs
NCBI-GeneID:
20677942
NCBI-ProteinID:
XP_009551647
JGI:
Hetan2_480925
UniProt:
W4JUP1
LinkDB
All DBs
Position
Unknown
AA seq
142 aa
AA seq
DB search
MSYFLPHLPSGWHVDEAIKSEEDRTVVIRFGHDWDTQCMTMDETLYGVAEKVQNFAVIYL
VDITEVPDFNKMYELYDPCTVMFFYRNKHIMIDLGTGNNNKINWAMDNKQELIDIIETVY
RGASKGRGLVVSPKDYSTRYRY
NT seq
429 nt
NT seq
+upstream
nt +downstream
nt
atgtcctattttctgccccaccttccttctggctggcatgtcgatgaagctatcaaatct
gaggaagaccgcactgtggtgatccgcttcggacacgactgggacacgcagtgcatgacc
atggacgagacgttgtacggcgttgcagagaaagtgcagaactttgccgtcatctacctg
gttgacatcaccgaagtcccagacttcaataagatgtacgagttgtatgacccatgcacg
gtcatgttcttctatcggaacaagcacatcatgatcgatttgggtactggtaacaataat
aagattaattgggctatggacaacaaacaagagttgattgatatcattgagacagtctat
cgtggcgcttcgaagggacgtggtctcgtagtttctcccaaagattactcaactcgctac
cgatactaa
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