Heterobasidion irregulare: HETIRDRAFT_50142
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Entry
HETIRDRAFT_50142 CDS
T03455
Name
(RefSeq) hypothetical protein
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
hir
Heterobasidion irregulare
Brite
KEGG Orthology (KO) [BR:
hir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hir03400
]
HETIRDRAFT_50142
Enzymes [BR:
hir01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
HETIRDRAFT_50142
DNA repair and recombination proteins [BR:
hir03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
HETIRDRAFT_50142
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Spuma_A9PTase
Motif
Other DBs
NCBI-GeneID:
20678132
NCBI-ProteinID:
XP_009548767
JGI:
Hetan2_50142
UniProt:
W4K037
LinkDB
All DBs
Position
Unknown
AA seq
587 aa
AA seq
DB search
MRILTWNLNGVRTIPQYHPWNVHKSWNGILQELGADILCFQGARVHRDSDTLTTEMKTTR
AAIGRDVALPELFDSFFSFPYSKGGYSGVAVYTKMDAVVPLKAEEGLSGKLQPKPALSPE
ERVSPSYPYAHEIDMMPDAEGNTPSDLSSLDSEGRALVVDLGLFVLINLYCPNETSDARL
PFKVNYHLLLQERVRKLIEEGRDVIVLGDINVCAAPIDHCDGHLPSNASTFWDHPAREWF
HKWLHPNGPMIDVVRDFWPDRKGMYTCWNTKISARETNYGTRIDYILVTPGLLPWIKHSD
IQPAVKGSDHCPVYVDLHDEITLASGDKLTLQDAMRMDGSKRDPPRIAAKYWEEFLGRQT
LLSSFFGKRDHSKATTQVAGSPQTPPSETLARSSTQPLPTAAFDALGSYQTEPSAATTLI
DAYPSQTTGIPTTSQATISPDGSEAPSTLTVEEAPAGAAKSKKPNRGQSKLSSFFAKPPP
TAKAPKPPEIVEIPDDDDNDGPMDADYRLACELSASQESALARSEAVASASGSQGSTKDP
SESREAWASLFAPVAPPKCAAHGEPAKELRVNKPGPNKGKTFYTCSR
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgcgtatattgacctggaatctcaacggagtccgcacaattccacagtatcacccatgg
aatgtgcacaagtcatggaacgggatcctccaggagctgggtgccgacatcctgtgcttt
caaggcgcacgcgttcatcgtgattctgacacgctgacaacagagatgaaaacaacacgc
gcggcaatcggtcgggatgtcgcattgccggagttgtttgactcgttcttttcattccca
tattcgaaagggggctacagcggtgtcgccgtctacaccaagatggacgcggtagtcccg
ctaaaagccgaggagggtctctctggcaagctgcaaccgaaacccgcgctgtcacccgag
gagcgtgtttcaccttcatatccttatgcacatgagatagacatgatgccagacgctgaa
ggcaacacaccttcggatctttcaagcttagactccgagggacgtgctcttgtcgtcgac
ctcggactctttgtcttaatcaatctctactgcccgaacgagacgtccgatgctcggctg
ccgttcaaagtcaactatcacttactcctgcaggaacgcgtcaggaagcttatcgaagaa
ggacgcgatgtgatcgttctcggtgacatcaatgtctgtgctgctccgattgatcactgc
gatggccatctgcccagcaatgcgagcactttctgggatcaccccgcccgagagtggttt
cataagtggctgcaccccaatggccccatgatcgacgtggtgcgcgacttttggcctgat
agaaagggcatgtatacgtgttggaacaccaagatcagtgcacgggagacgaactatggt
acgcggattgattatatcctagtcactcccggcctgctgccgtggatcaaacacagtgac
atccaacctgcggtcaagggctctgatcactgtcctgtgtatgtcgacttgcacgacgag
atcacgctcgcctcgggcgacaagctcaccttgcaggacgcgatgcggatggacggcagc
aagcgcgatccgccccgtatcgccgccaagtactgggaagaattcctcggcaggcagacc
ttgctgtccagttttttcggcaagcgcgaccatagcaaggcgactacgcaggtggcaggc
tccccacaaacgcccccttcagagacactcgctcgctcatccacacagcctcttcccaca
gccgctttcgatgcattaggatcttatcagacagagccgtctgctgccacgactctgatc
gatgcatacccttctcagacgacggggatccccaccacctctcaagctacgatctcgcca
gacggaagcgaagcacctagtacactcactgtcgaagaagcacccgcaggcgcagccaaa
tcgaagaagcccaatcgcggccaatcgaagctttcgtccttcttcgccaaaccgcctccg
acggcgaaggcgcccaagcctcccgagatcgtcgagattccggacgatgacgacaacgac
ggccccatggatgcggactatcgcctcgcctgtgagctctctgcgtcccaagaaagcgcc
ctcgcgcgcagcgaggccgtcgcctccgcatcgggatcgcagggctctacgaaggatccg
tccgaaagcagagaagcctgggcatccctcttcgccccagttgcaccacccaaatgtgcc
gcccacggcgagccggcgaaggagctgcgtgtcaataagcctggcccgaacaagggcaag
acgttctacacctgttctaggtaa
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