Heterobasidion irregulare: HETIRDRAFT_54539
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Entry
HETIRDRAFT_54539 CDS
T03455
Symbol
RNase_H_1
Name
(RefSeq) RNase H type II
KO
K10743
ribonuclease H2 subunit A [EC:
3.1.26.4
]
Organism
hir
Heterobasidion irregulare
Pathway
hir03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
hir00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HETIRDRAFT_54539 (RNase_H_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hir03032
]
HETIRDRAFT_54539 (RNase_H_1)
Enzymes [BR:
hir01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.4 ribonuclease H
HETIRDRAFT_54539 (RNase_H_1)
DNA replication proteins [BR:
hir03032
]
Eukaryotic type
DNA Replication Elongation Factors
RNase H
HETIRDRAFT_54539 (RNase_H_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_HII
Motif
Other DBs
NCBI-GeneID:
20678306
NCBI-ProteinID:
XP_009544644
JGI:
Hetan2_54539
UniProt:
W4KD72
LinkDB
All DBs
Position
Unknown
AA seq
285 aa
AA seq
DB search
MSSDEESPDHNRPPSIPDPQPPLTASYTYHSPTPTAKGPYVLGVDEAGRGPVLGPLVYGV
AYCPAAYEERLNEMGFADSKTLNAQTRSNLLRSLSGSPANLGWSVRVVSPQAISSGMLRR
PPINLNRQSEDATILLIREVLQSGLELSEVYVDALGPTKAWEANLSAQFPGINFTVTAKA
DSKFKIVGAASVAAKVTRDAWIEGWVFEESAPGVPDDTMTDGAKKVPWSLQLGSGYPSDP
KTQAWIKSSLDKTFGFPSIVRFSWTTVKVVLEKDGHALEWSATLS
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgtcatctgacgaagaatctccagaccataacaggccgccttcaatcccagatcctcaa
cctcctctcactgcatcgtacacctatcattcccccactcctaccgctaaagggccttat
gttctgggcgtagatgaggccggaaggggaccggttctcgggcctttagtgtatggcgtt
gcctactgccccgctgcctatgaggagcggcttaacgagatgggttttgctgattcaaaa
actttgaacgctcagacgcgctcaaatctgttgagatcactgagcgggagccctgcgaac
ctagggtggtccgtgagggtcgtcagcccgcaggccatctcaagtgggatgctccgtcgt
ccaccgatcaatctcaatcgacaatctgaagatgctactatccttctcattcgcgaagtc
ctgcaaagcggactcgagttatctgaggtgtacgttgatgcacttgggccaacaaaggcc
tgggaggcgaatctttctgctcaatttcctggtatcaactttacggtcaccgccaaagct
gattcaaaattcaaaatcgtgggtgcagcaagcgttgctgccaaagtaacaagagacgcg
tggattgaagggtgggtatttgaagaaagcgcaccaggcgtgccagatgataccatgacc
gacggcgccaagaaggtaccatggagcctccagcttggtagcggctatccttcagatcct
aaaacacaggcatggatcaaatcatcgctcgacaagacttttgggttcccttcaatagtg
cgcttttcctggacaacggttaaggtcgtgctcgagaaagacgggcatgccttggaatgg
tctgccacgctcagttga
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