Heterobasidion irregulare: HETIRDRAFT_56935
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Entry
HETIRDRAFT_56935 CDS
T03455
Name
(RefSeq) hypothetical protein
KO
K14655
tRNA pseudouridine32 synthase / 2,5-diamino-6-(5-phospho-D-ribitylamino)-pyrimidin-4(3H)-one deaminase [EC:
5.4.99.28
]
Organism
hir
Heterobasidion irregulare
Pathway
hir00740
Riboflavin metabolism
hir01100
Metabolic pathways
hir01240
Biosynthesis of cofactors
Module
hir_M00911
Riboflavin biosynthesis, fungi, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:
hir00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00740 Riboflavin metabolism
HETIRDRAFT_56935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hir03016
]
HETIRDRAFT_56935
Enzymes [BR:
hir01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
HETIRDRAFT_56935
Transfer RNA biogenesis [BR:
hir03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HETIRDRAFT_56935
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
Ub-RnfH
Motif
Other DBs
NCBI-GeneID:
20678379
NCBI-ProteinID:
XP_009553051
JGI:
Hetan2_56935
UniProt:
W4JM89
LinkDB
All DBs
Position
Unknown
AA seq
491 aa
AA seq
DB search
MAPEDTSSTVSVRPGLKKVTPYWFPYTTMAKARWYDREILEVVSTEFRDRSVEYYRFALD
SGVTTINGKVAKPDTVVRNGDRIENIVHRHEPPVTSTPVRVLYEDLEREFIVIDKPGSIP
VHATGRFFYLSLVEILQREFGYKKVYTVNRLDRLTSGLMVVGLSSQRAHTLSTEFVAGTV
RKEYIARCAGEFPAEEVTVEEPLLTVDRQMGLNIVHPEGKFLLTYPQPAKTIFKRLHYDV
NTDTSVLHCRPLTGRSHQIRVHLQYLGHPIANDPIYSETKIWGAKLGKGGIDVKPSTERS
APVPPPQFQPLQEPEHVSKPSEPVSTVASTKLLPRETGQDIGMGSPVPLSAEAVGIITRL
RNMKDEDEDWSRWRDVVFKTKSRLHPQGMKVKPLPPQNRRKRGGPSWVDENSDKGSPAPS
DTGVYTPASDSATPANDGMLYCPECYLPLHPDPKPERLYIFLHALRYTTSLGTFETGMPE
WAAEGWEWDRS
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atggcccctgaggatacatcgtcgacagtatccgttcgaccaggactgaaaaaggttacg
ccatattggtttccatacaccacaatggcgaaggctcgttggtatgatcgagagatctta
gaagttgtgtctaccgaattccgagatcgttctgtggaatactatagattcgcacttgac
tcgggcgttaccacaatcaacggcaaggtcgcaaagccagataccgttgtccgcaatggc
gacagaatagagaatattgtccaccgacacgagccccctgtgacctctacgccagtgaga
gtcctctatgaagaccttgaacgagaattcatcgtaattgacaagcctggaagcatccct
gtccacgcaactggccggttcttctacctctcgctcgtggagatcctacaacgcgagttc
ggttacaaaaaagtttacaccgtgaatcgtctcgatcggctgacctctggcttgatggtc
gtcggcctatcctcgcagagggcacacacactttccaccgaatttgttgccggaacagtg
agaaaagagtacatcgcacgctgtgcaggagagtttccggccgaggaggtaacagtcgaa
gaacctttattgactgtggatcgtcaaatgggtttgaacattgttcaccccgaaggaaag
ttcctcctgacatatccacagcccgccaaaaccatattcaaacgcctacattatgatgtc
aacacagataccagcgttttacactgtcgacctctcactggccgctcgcatcaaattcga
gtccatctacaatatctaggacacccaatcgcgaacgaccccatctattctgagaccaaa
atctggggggcgaaactcggcaaagggggcatcgatgtcaaaccgtctacagaacgctcc
gcgcctgtcccaccgcctcagttccaacctttacaagaaccggaacatgtctcgaagcca
tcagaacccgtgtctactgtagcatcaaccaaattgctaccacgtgaaacaggacaagac
atcggaatgggctcgcctgtcccactatcggcagaggctgtgggcatcatcacgcgcctg
cgaaatatgaaggacgaagacgaagactggtcgcgatggcgcgatgtcgtatttaaaaca
aagagccggctgcatccccagggaatgaaagtaaaacccctacccccacaaaacaggcga
aaacgcggtgggcctagttgggtagacgaaaacagcgataaaggcagtccggccccaagt
gacactggagtgtatactcccgcgtccgattctgccacgcctgcgaacgacgggatgctc
tactgcccggagtgttacttacctctgcatcccgatcccaagccggagaggctatacata
ttcttgcacgcgcttaggtacacgaccagtctgggaacattcgagactggtatgccagag
tgggcggcggagggctgggaatgggatcgatcgtag
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