KEGG   Heterobasidion irregulare: HETIRDRAFT_61922
Entry
HETIRDRAFT_61922  CDS       T03455                                 
Name
(RefSeq) hypothetical protein
  KO
K03143  transcription initiation factor TFIIH subunit 3
Organism
hir  Heterobasidion irregulare
Pathway
hir03022  Basal transcription factors
hir03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:hir00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    HETIRDRAFT_61922
  09124 Replication and repair
   03420 Nucleotide excision repair
    HETIRDRAFT_61922
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hir03021]
    HETIRDRAFT_61922
   03400 DNA repair and recombination proteins [BR:hir03400]
    HETIRDRAFT_61922
Transcription machinery [BR:hir03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     HETIRDRAFT_61922
DNA repair and recombination proteins [BR:hir03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     HETIRDRAFT_61922
SSDB
Motif
Pfam: Tfb4
Other DBs
NCBI-GeneID: 20678575
NCBI-ProteinID: XP_009546973
JGI: Hetan2_61922
UniProt: W4K6A4
LinkDB
Position
Unknown
AA seq 346 aa
MDKPSHLSLVLDLSPSQWLLSAQHTNPFPLPFHTFLAHLLTFLNAHAAAQHDNSLAVFGA
FPGKSVQLYSSTDPHTEPDEGSPSLANAVADANSYRPFKLVDAAIARAIARELDLLGEQD
EEAPVALVGALTKALCYINRITHVPAGATTPEDPATQASPRILILSVSPDLSSSYIPIMN
SIFSAQKLKITIDVCKLFGPETVFLQQAAHLTGGSYIYLERRDALLQYLIMSFLPPPAVR
AVLAVPTQDKIDFRAACFCHKNIVDIGFVCSVCLSIFCSPVPVCSTCRTKFPIKTLQRLN
ASRPPGPINRAAGSGTGGAGAANGTPPRPLQSAAGRQNTPLSASLR
NT seq 1041 nt   +upstreamnt  +downstreamnt
atggataaaccgtcccatctgtcgctcgtcctcgacctctccccttcccaatggctcctc
tccgctcagcacacgaacccctttccgcttcctttccacaccttcctcgcacacctcctc
accttcctcaacgcccacgccgccgcacaacacgataactccctcgccgtcttcggcgcc
ttccccgggaagagcgtgcagctctattcctcgactgacccgcacacggagcctgatgaa
ggctccccctctctcgcgaatgcagtagcagacgccaactcatatcggccgttcaagctc
gtcgacgctgccatcgcacgcgccatcgcacgcgagctagacctactcggcgagcaggat
gaagaagcacccgtcgccctagtcggtgcactcaccaaagcgttatgctatatcaaccgc
atcacgcacgtccccgccggggcgaccacacctgaagaccccgccacccaagcttccccc
cgcatcctcatcctctccgtttcccccgacctctcctcctcgtacatccccatcatgaac
tccatcttctccgcgcagaagctgaaaatcacgatcgacgtgtgcaagctgttcgggccc
gagacagtctttctgcagcaagccgcccatctcacgggcgggtcgtacatctacctcgag
cggcgtgacgcgctgctacagtacctcatcatgtcgttcctcccacctccagcggtccgc
gccgtgctcgccgtgccgacgcaggacaagatcgatttccgcgcggcgtgcttctgccac
aaaaacatcgtagacatcggcttcgtctgctccgtctgcctctccatattctgctcaccg
gtcccagtgtgctcgacctgccggacaaagttccccatcaagacgctccagcgtctgaac
gcgtcccgaccgccagggcccatcaacagagctgcaggcagcggtaccggtggggcgggc
gcggcgaacgggacgcccccgaggccattacagtcggccgcggggcgccagaacacgcca
ttatcagcgagcttgcggtaa

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