Heterobasidion irregulare: HETIRDRAFT_62610
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Entry
HETIRDRAFT_62610 CDS
T03455
Name
(RefSeq) hypothetical protein
KO
K12178
COP9 signalosome complex subunit 4
Organism
hir
Heterobasidion irregulare
Brite
KEGG Orthology (KO) [BR:
hir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hir04121
]
HETIRDRAFT_62610
Ubiquitin system [BR:
hir04121
]
Deubiquitinating enzyme (DUB)
UBL-specific proteases (ULPs)
COP9 signalosome (CSN) complex
HETIRDRAFT_62610
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PSMD12-CSN4_N
PCI
RPN7
ARM_TT21
Motif
Other DBs
NCBI-GeneID:
20678606
NCBI-ProteinID:
XP_009543264
JGI:
Hetan2_62610
UniProt:
W4KFX7
LinkDB
All DBs
Position
Unknown
AA seq
453 aa
AA seq
DB search
MDQKFAKFDALNQKDKGAAYLSLLSDVFTTSNGPQLIQDIHILVDHVVNQDNAGFIVGRQ
VLSELVKILNEGGVSTLNLDLRKQIVEDILATVQPRLTSYEEQVNLLRFHLADILEHEED
WSEAARVLMGITLEASQRTTDEDKLRVYIRIVRLLLEEEDSVQADSYYNRAASLIHSTSD
KVTLLAFKLCQARISDYGRKFLEAAGRYHELSFVGEIDEDERSHMLSAAVTCAVLAPAGP
NRSRILASLYRDERTAELPTFNILSKMFLDHILRPAEVKEFEKILKPHQLAKIALSTNDR
LASAIQGDDELSGDNVSARTGPATVLDRAVMEHNVLASSKIYNNITFRGLGALLDLTPGA
AETMARKMIEQGRLKGHIDQVEKLIWFEAAKEEDDAQGKAGGLGDVNQDTEDTGALFTKR
WDLQIRLTAASVETMVQHLSEKGLVGLALTTNA
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggaccagaaatttgcgaaattcgatgccctcaaccagaaggacaaaggcgctgcctat
ctttcgctcctgtccgatgtatttaccacgtcaaatggccctcaactcattcaggatata
catatactcgtcgaccatgtcgtgaatcaggacaatgccggtttcattgtcgggagacaa
gtcctgtccgagcttgtgaagattctgaatgagggcggcgtctctactttaaatctagat
ctgcgaaagcagatcgtagaggatatcctggccacggtccaaccgcgcttgacgagctac
gaggaacaagttaatctcctcagattccacctcgccgacattcttgagcatgaggaagat
tggtctgaagccgcgcgtgttctgatgggaatcaccctcgaggcgagtcagcgtacgaca
gatgaagataagctgcgcgtctacatacgtatcgttcggcttctgctcgaggaagaagac
tccgttcaggccgacagttactacaatcgtgccgcttctctcattcattctacaagcgac
aaggtcaccttgcttgctttcaaactctgtcaagcgaggatcagcgactatggcagaaag
tttcttgaagccgccggacgttatcacgaactcagctttgtaggtgagatcgatgaggac
gaacggagccatatgttatctgcagctgtcacatgcgccgtcctcgcaccagcaggacca
aatcgctcccgcatacttgcatccctatatcgcgatgagagaacggccgaacttcccacc
ttcaacatcctctccaaaatgttcctcgaccatatcctccgcccagcagaggtaaaggag
ttcgagaagatcctcaaaccccatcaactcgccaaaattgccctttccaccaatgatcgg
cttgcttcagctatccagggagatgatgagctttctggtgataacgtcagcgcccgcact
ggtccagctacagtccttgatcgcgctgtcatggagcataacgtgctcgccagctccaaa
atttataataacataactttccgggggttgggtgcgctattagacttgactcctggtgca
gctgagacgatggcgcggaagatgatcgagcagggtcggctgaaaggacatatcgaccaa
gtggagaagctgatctggtttgaagcggccaaggaggaagatgatgcgcaaggtaaggct
ggcgggttaggagacgtgaatcaggacacggaggacacgggcgcactcttcacgaagcga
tgggacctgcagatccgtctgacagcagccagtgtcgagactatggtacaacacttatca
gagaagggcttagtaggactagcgctcacgacgaacgcgtga
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