Heterobasidion irregulare: HETIRDRAFT_63200
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Entry
HETIRDRAFT_63200 CDS
T03455
Name
(RefSeq) hypothetical protein
KO
K14416
elongation factor 1 alpha-like protein
Organism
hir
Heterobasidion irregulare
Pathway
hir03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hir00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
HETIRDRAFT_63200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hir03019
]
HETIRDRAFT_63200
Messenger RNA biogenesis [BR:
hir03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
HETIRDRAFT_63200
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
20678630
NCBI-ProteinID:
XP_009543288
JGI:
Hetan2_63200
UniProt:
W4KHD8
LinkDB
All DBs
Position
Unknown
AA seq
427 aa
AA seq
DB search
MGRLLYELGRVDEKRKVANERASDKIGKGSFSWAWELDGTSEERERGVTMDVALQVLETP
HRNITILDAPGHRDFIPNMISGASQADCALIVVDASTGEFEAGFERGGQTREHLVLVRSL
GVTQVIVAVNKLDQVDWSQDRYDDICSQLKAFLVQSGFHPSKTYYVPVGAMAGVNLTNRK
GAESAILTQWYSGPTLVDLLDILQPPMRDISSPLRFPISNVFKGQGSGTGVSGRICGGVV
QVGERLRILPGDETGIVKGNLPCSAIETETENLPWAAAGMNATLYLTAVDPVHLNIGSVL
CPPTNLIPLATVFTARIIVFDIQVPILAGTSVELFHHSHDVPASISKLNSTLDRATGIPI
KKNPRVLTKGTSAEVQITIRPGSFSGPATRALPIPLEPFSASKEMGRILIRRGGETIGAG
IVLEILG
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgggaaggttgctctatgaacttggtcgggttgacgagaaacgcaaggtcgctaatgaa
cgagccagcgacaaaattggcaaaggtagcttcagctgggcttgggagcttgatggcacc
tctgaggaacgagaacgtggagttacaatggatgttgcactgcaagtcctagagacgccg
catagaaacatcaccatcctcgatgctccaggacatagagacttcattccgaacatgatt
tctggagcatctcaggcagactgcgcgctcatcgtcgtagacgcctcaactggagagttt
gaggctgggttcgagcgcggggggcagactcgcgagcacttggtactcgttagaagtctt
ggtgtgacccaggtgatcgtggccgtcaacaaactcgaccaggtcgattggtcgcaagat
cgttatgatgacatatgttctcaattaaaggcgttcctcgttcagtccggctttcatccc
tccaaaacgtattacgttcctgttggcgctatggctggcgttaatttgaccaaccgcaaa
ggggctgagtctgcgattttaactcaatggtacagtggaccaactttggttgaccttctt
gatattcttcaacctcccatgcgggatatctcaagccccctgcgctttcctatttccaat
gtattcaagggacaaggctctggcacaggagtttctggtaggatttgtggcggtgtcgtc
caggtcggcgagcgccttcgcatcttacctggggatgaaacgggcattgtgaagggcaat
ttgccatgctcagccatcgagactgagactgagaacctgccgtgggcggcagctggcatg
aacgcgactctttatttgacggctgtagatcccgtccacctcaatataggcagcgtgtta
tgtcctcccacgaacttgattccactggcgaccgttttcaccgcacgaatcatcgttttt
gacatacaagtccccatccttgctggaacatctgttgaacttttccaccattcgcacgac
gtacctgcttccatctcgaaactcaactcaacactcgatcgcgcgactggtatcccgatt
aagaagaatcctcgtgttctgacgaagggaacatctgccgaggttcaaataactatccgc
ccagggtcgttctcaggccctgcaacacgcgcgctgcccatcccgcttgagcctttctcg
gccagcaaggagatgggtcgcatcttgatcagacgtgggggagagaccatcggggccggg
attgtactcgagattctcggctga
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