Heterobasidion irregulare: HETIRDRAFT_99556
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Entry
HETIRDRAFT_99556 CDS
T03455
Name
(RefSeq) hypothetical protein
KO
K13091
RNA-binding protein 23/39
Organism
hir
Heterobasidion irregulare
Brite
KEGG Orthology (KO) [BR:
hir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hir03041
]
HETIRDRAFT_99556
Spliceosome [BR:
hir03041
]
Common components
Common spliceosomal components
General mRNP proteins
HETIRDRAFT_99556
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_5
RRM_3
RRM_RdRP1_2
RRM_occluded
RRM_7
Motif
Other DBs
NCBI-GeneID:
20678909
NCBI-ProteinID:
XP_009541101
JGI:
Hetan2_99556
UniProt:
W4KQ28
LinkDB
All DBs
Position
Unknown
AA seq
471 aa
AA seq
DB search
MNDSVESRDHDERAKKKRSDNIIDAEALPHPPTSAGLPAPPLPLRDSPRRGSDRGHSHDR
PPRLPRDPRDEFDDPPRYRAGRERDRELDRRDDRRNDDRRRPRRSPPPPPPPMKRPSPTY
DLPPDDPMNEEPKEDDSEARSVFVSQLAARLTARDLGYFFEDKLGEGTVLDARIVTDRLS
RRSKGIGYVEFRAIDLVEKALALSGTVVMGLPIMVQLTESERNRLHPGDGNLNLPPGVSA
PHGAMQLYVGSLHFNLTESDIKQVFEPFGELEFVDLHRDPMTGRSKGYAFVQYKKSEDAK
MALDQMEGFELAGRTLRVNTVHEKGTTRYTQQDSLDEAGGGNLNAASRQALMQKLARIEP
ARDKQEPIMKPNIPQAMESKSVLLKNMFDPEEETERDWDKDLADDVKGECEEKYGPVDRI
KVVKESQGEIYLKFGTVDAARQAVQGLNGRWFGGKPVSAAFVSDAIMQAYQ
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgaatgactctgtcgagtcccgcgatcatgatgaacgcgcgaagaaaaagcgtagcgac
aacattatagacgcggaggctctaccacatccacctacatccgcaggtctacccgcgcct
cctcttcccctgcgagatagtcctcgcagaggatcagacagaggacattcgcacgatagg
ccacctcgattgccccgcgacccacgcgacgaatttgacgacccaccgaggtacagggca
ggtcgcgaaagagacagagagcttgatcgtcgtgatgaccgccgcaatgatgaccgccgt
agacctcgaaggtcaccgccaccgccaccgccacccatgaaaagaccttctccaacttac
gatcttccacctgatgaccctatgaatgaggagccaaaggaggacgattcggaagctcgt
tctgtcttcgtatctcagcttgccgcacgtcttactgcccgtgatctcggatacttcttt
gaggataaattgggtgagggcacagtccttgatgcgaggattgtgacagacagattgtct
aggcgatcaaaaggtattggttacgttgaattccgtgccattgatctggttgagaaggct
ctcgcactaagtggaacggtggttatgggcctccctatcatggtccagttaactgaatct
gaaaggaacagacttcatccaggagacgggaacctcaaccttccacctggtgtcagtgcg
ccgcacggggccatgcaattatacgtcggttccctgcatttcaatctcaccgaaagcgat
attaagcaggtgtttgaaccatttggagaacttgaatttgtcgatcttcacagggatccc
atgactggtcgaagcaaaggctatgcatttgtccagtacaagaagagcgaagacgcgaaa
atggctttggaccagatggaaggcttcgagctcgcgggtcgtacattacgggtcaatacg
gtgcatgagaagggaactacaagatacactcagcaggattccttagatgaagctggcggc
ggtaatttgaatgcagcatctcgtcaggcgctgatgcagaaacttgccaggattgaacct
gctcgagacaaacaggaaccgatcatgaaacccaacattccgcaagctatggaatccaag
tcggtcctgctcaagaacatgttcgatcctgaagaggaaaccgaacgggattgggacaag
gaccttgctgacgatgttaaaggcgaatgtgaagaaaagtatggccccgtagaccgtatc
aaggtcgtgaaagagtcacagggagagatttatctcaagttcggcacggtcgatgcagct
cgccaagctgtccaaggactgaatggtcgctggtttggtggaaaaccggtgtcggctgct
ttcgtctcggacgcgatcatgcaagcttaccaatga
DBGET
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