Hermetia illucens (black soldier fly): 119650019
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Entry
119650019 CDS
T08287
Name
(RefSeq) probable DNA mismatch repair protein Msh6 isoform X1
KO
K08737
DNA mismatch repair protein MSH6
Organism
his
Hermetia illucens (black soldier fly)
Pathway
his03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
his00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
119650019
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
his03400
]
119650019
DNA repair and recombination proteins [BR:
his03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
119650019
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
UBN_AB
Motif
Other DBs
NCBI-GeneID:
119650019
NCBI-ProteinID:
XP_037908418
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Position
2:61929510..61952534
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AA seq
1081 aa
AA seq
DB search
MSKRQSGNTLLNYFSKTPSTPKSAKVENGDAENRKESKCDDADKSVISKRNFPKDESSSE
EEVELFKFNLKKRRRIQSNSDSDSEKEKKVLKVEKVAPATPKTPKAKVKDISETEKEAIT
GDDVNYAHTRLEFLKPENIKDAKGRRPTDPNYDRRTLYVPEKFLSTLSPGVRQWWDLKSH
NFDCVLFFKVGKFYELYHMDADIAVKELECTYMRGDFAHSGFPEISYEKMATKLVERGYK
VARVEQTETPDMMAQRCKTQRQVTKFDRVVKREICQITNRGTQVPGVQTSFEGDHKPNYM
LAIIEKVEETGRTYGVCFIDTAIGEFTMGQFSDDKNASRLRTLISHNSPALILYGKDKIS
NETQHIIKTVLCNAIKEMVPNTPYIWDAEKAFSNLVEKYFANNEDAKLPETIKEIKDEDG
LKSKKVYELCVNALGACIWYMQQCLIDQRVLSMASFKIYTPPDVRITTTEDDIKPVVDHR
RYMVLDAITLSNLRLIGGELSLLNTLDQCCTKFGKRLLHFWVCCPSYSVNEIKRRQEAIS
EFISKNNKADEIRSFLSTLSDFEKQLSQIHGFGARPRNSDHPDSRAVLFEEKIYNTKKIQ
NFIGLLRGFESLVDIPEKFSEFQSSKLIRKLSQLAPEGEYPDLKPLLEFFENAFDHKEAL
EQGIIAPEKGVDVEFDSVEEKIENLKTEMQEYLSEQKAYFGCEVKYFGNDKKRFQLEIPE
NKTKKATSEYFLEGQKKGTHPVRRYNTAETKDFLKRMMQLEDERNKVLKEIAGRIFKQFS
SHYAVWKKCLDCIAELDVLLSLAAFTKNQQVVCVPEVYDNSESPFIEIEEGCHPCVATAD
DFIPNDITIGGESTGSLFLLTGPNMGGKSTLMRQVGLISVLAQMGAHVPARSCRMSLIDR
IFTRLGAQDDILAGHSTFLVELNETSSIIKDATKKSLVLLDELGRGTATYDGTAIAVAVA
NFLADLGCRSIFSTHYHNLIHYFQDDKRVTLGHMSCMVENEDDEDPTQESVTFLYKLAPG
ACPKSYGFNAAKLAGMPNEITKRASNISKTFMEHSIRKKLFAKILCKSSVPMIRQLIKSQ
Y
NT seq
3246 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaacgacaaagtggaaatactcttttgaactatttctcgaagacaccctctacc
ccgaaaagtgcaaaggttgagaacggagatgcggaaaatcgcaaggaatccaagtgcgac
gatgccgacaaatcggttataagcaagcgtaattttccgaaggatgagagttcaagcgaa
gaggaggttgagttgtttaaattcaatttaaagaaacgtcgcaggattcagagcaattcg
gattcggattcagagaaagaaaagaaagtgctcaaggttgaaaaggtcgcgcctgcaacc
ccaaaaaccccaaaagcaaaagtgaaggacatttccgagactgaaaaagaagcaatcact
ggagatgatgtgaattacgcccacaccagattggaattcctaaaaccggaaaatattaaa
gatgctaaaggacggcgacccactgatccgaactatgatcgccgcacactctacgtaccc
gaaaaattcctttcaacactatcacctggtgttagacagtggtgggatttgaaatcacat
aatttcgattgcgttctattcttcaaagtcggcaagttctacgaattgtaccatatggac
gcagacattgccgtgaaagaacttgaatgcacttatatgagaggggattttgcacattcc
ggatttcctgaaatttcctatgaaaagatggcaacgaaacttgtggaacgtggatataag
gttgcaagagtcgaacaaacagaaactcctgatatgatggcgcaaagatgtaaaacccaa
cgtcaagtaactaaatttgatcgagttgttaaacgggaaatttgtcagattacgaatcgt
ggaacgcaagttcctggagtgcaaacatctttcgaaggggatcataaacccaattatatg
ctggccataattgaaaaggtggaagaaaccggtaggacatacggagtttgtttcattgat
acagccatcggagagttcacaatgggccagttttcagacgataaaaatgcctctcggctt
cgcactcttatctcccataactcacctgcattgatactgtatggaaaggataaaatttca
aatgaaacgcagcatattattaaaactgttctttgtaatgctattaaggaaatggttcca
aatactccgtacatttgggatgccgaaaaagcattttcgaacttagtagaaaagtatttt
gcaaacaacgaagatgctaagctcccggaaacgataaaagaaatcaaagacgaagatgga
ttaaaatcgaaaaaagtatatgaactttgtgtgaatgcattaggagcttgcatttggtac
atgcaacaatgcctaattgatcagcgagttttatcaatggcttcctttaaaatctacaca
cctcctgatgtccgcataactactacagaagatgacatcaaaccagtagtagatcataga
cgttatatggttttagatgcaattaccttatcaaatctgcgtttgattggaggagagcta
tcgttgttgaataccttggatcaatgttgcaccaaatttggcaaacgattacttcacttt
tgggtatgttgtcccagttacagtgtcaatgaaattaaaagaagacaagaggctatttct
gaatttatttcgaaaaataacaaagcggacgaaattcgcagttttctcagcacactttca
gattttgaaaaacaattgtctcaaatccatgggtttggagctcggcctagaaactcggat
catccagatagtcgagctgtactttttgaggagaaaatttataacacgaagaaaattcag
aacttcattgggttacttcgaggctttgaaagtttggtagatattcctgagaaattttct
gagtttcagtcgagcaaactcataagaaagctatctcaacttgcaccagaaggagaatac
cccgacttaaaacctctattggagttcttcgaaaatgcttttgatcacaaagaagcacta
gaacagggtattattgcacctgaaaaaggagtggatgtggagtttgattcagttgaagaa
aagattgaaaatctgaaaaccgaaatgcaagagtatctttcagaacaaaaagcttacttt
ggatgtgaagttaaatattttgggaatgacaaaaaacgttttcaactcgaaattcccgag
aataagactaaaaaggctacttccgaatattttttggaaggccagaagaaggggacacat
cctgtacgacgttataatacagcagaaactaaggatttcttaaaacgaatgatgcaattg
gaagacgaaagaaataaagtattaaaagagatagcaggtcgcatttttaagcagttctct
agtcattacgctgtgtggaaaaaatgcttagattgcatagcggaactagatgtattgcta
tctttggcagcattcactaaaaaccaacaagtggtttgcgttcccgaggtttacgataat
tctgaatcaccatttattgaaattgaagaaggatgtcatccatgcgtggctacagctgat
gacttcattcctaatgacattacaattggtggggagtcaacaggctcactgttcctgcta
actggtccgaatatgggcggaaagagcaccttgatgcgacaagtcggattgatttcagta
ttagcacaaatgggtgcccatgttcctgcaagaagctgtagaatgtccttaattgaccga
attttcactagattgggagcacaggatgatattttagcaggacacagtacatttttggtt
gaactgaatgaaacatcatcaatcatcaaagatgctactaaaaaaagtctagttttgctg
gatgaattaggtagaggcacagccacgtatgatggaacggccatagcggttgcagtggca
aactttttggctgatttaggttgccggtccatattttctactcattatcacaatcttata
cattacttccaagacgataaacgtgtgacattgggacatatgtcatgcatggtggagaat
gaggatgatgaagatcccacccaagaatcggtgacattcctctataagttagccccaggt
gcttgcccgaaatcgtatggattcaatgctgccaaattggcaggaatgccaaacgaaatt
acaaagagagcttcaaacatttccaaaacatttatggagcactcaataagaaaaaaatta
tttgcgaaaattctttgtaaatcgagcgtacctatgataaggcaactgatcaaatcacaa
tattga
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