Hermetia illucens (black soldier fly): 119650384
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Entry
119650384 CDS
T08287
Name
(RefSeq) collagen alpha-1(XVIII) chain isoform X1
Organism
his
Hermetia illucens (black soldier fly)
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Gene cluster
GFIT
Motif
Pfam:
Endostatin
Collagen
Collagen_trimer
DUF1554
Motif
Other DBs
NCBI-GeneID:
119650384
NCBI-ProteinID:
XP_037909052
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Position
2:170400353..171169189
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AA seq
1156 aa
AA seq
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MYLRWTSKMLSVIILTLAIFNANAITFRGQPIQNVFQEYSLLDAIKFSMDEHVEFADGPD
NFSSYVFKLQSEVKSPYRTILPESLKQFAIMITFRPETRSGGYLFSIVNPLDTVVQLGIH
LSAAMTDKWNATLLYTDPMAKTSKKLATFEIPYAKKWQTIAFEVRFKEVVFFYNCNKTET
QAVERSPEEMTFDSASTLYLAQAGSIIKGRFEGAFARLHIYGNPDVIPILCKGTVANIMD
KNEKEAEGSGVEELLDDELVELDDWATDTDFDDTLQPPMIPPPPDRGYRGMKGEKGDRGL
KGPPGDSIRGPPGPPGPPGPKGDQGPLPPYVDIRSPSDSKIDSSGKCGCNATSILELIKA
DTVRESLRGPPGLPGKEGKTGAPGLTGPTGTPGERGAPGPKGDRGDRGDPGPRGPEGLQG
HKGEPGVDGAPGLPGVPGPPGAPGLSDAYDESLIGNGMQTLRSGTPGAKGEPGTKGEMGR
PGERGQPGAKGDRGDPGMTGAKGERGHPGPHGATGLKGEPGQPGIPGLAGPPGAIGNKGD
RGSQGEIGPIGPPGPPGTVLYSDAKNVTECTCQAGPPGQPGPRGPAGFDGEPGSPGEPGT
VGLTGLPGQVGEKGEKGEKGLRGPAGIKGDRGPEGPPGRSIFSADGLMNGTKGEKGDRGL
KGKRGKPGPQGPMGPPGPPGPKGHSGDTGLPGPWAGTGRPGPPGPKGETGQKGQRGEGAK
GDKGDRGTDGKPGLPGPPGLPSASDGVQFIPVTGPPGPPGPPGPPGIPGLSITGPKGEPG
LESRTPYFGDPAYYGKPGGRSSLDEIKALRELQSLKELPESTSGPPGPPGPPGPPSPSMR
ADHQDSSSGMKIVPGAVTFQNTEAMTKMSALSPVGTIAYIIEEEALLVRVNKGWQYIALG
SLLPIVSPAPPTTIAPPPRPDLQASSLLNNASQFVEGPNFTMSPQYETWYPRMLRLAALN
EPYTGDLQGNRGADFACYRQARRAGLLGTFKALLTARVQNLDAIVRPADRELPVVNTKGD
VLFNSFKGIFNGQGGFFSQAPRIYSFNGKNVLTDLTWPQKIVWHGSLPNGERAMDTYCDA
WQESSPDKVGLASSLLGNKLLDQERYSCDNRFVVLCIEALSQDRRRKRDLRQSDENEITS
VEDYENHLEEIFSIPH
NT seq
3471 nt
NT seq
+upstream
nt +downstream
nt
atgtacttaaggtggacatcgaaaatgctgtctgttataatactaacgctggcaattttc
aatgcaaatgcaatcacgtttcgtggacaaccgatacaaaatgtgttccaggagtacagt
ctattggacgcaatcaaattctcaatggatgagcacgttgagttcgcagatggccctgac
aatttttcatcatacgttttcaagttgcaatctgaagtgaaatctccttatcgaacaata
cttccagagagtctgaagcagttcgccatcatgatcacatttcggccagagacgcgttcc
ggcggctacttattcagcattgttaaccccctggataccgtcgttcaattgggtatccac
ctttcagcagcaatgacggataagtggaatgcaacactcctctacacggatccaatggcc
aagaccagcaaaaaactggcgactttcgaaataccgtatgcgaaaaaatggcaaactatc
gcctttgaagtgcgattcaaagaagtggttttcttctataactgcaataaaacggagacg
caggcagtggaaaggtcccccgaggagatgactttcgactcagcttcaacattgtacttg
gcacaagcaggatctatcataaaaggacgctttgagggtgcattcgctcgacttcatatc
tatgggaatcctgatgttattccaattctgtgcaaaggaactgtggcgaatattatggat
aaaaacgaaaaagaagcagaagggtctggcgtagaagagttattagatgacgaattagtt
gaacttgatgactgggccactgatactgatttcgacgatactttgcaaccaccaatgata
ccgccgccaccagatcgaggttatcgtggcatgaaaggagaaaaaggtgatcgaggtttg
aaaggtcctccaggagacagtattcgaggacctcctggtccgcctggaccaccaggaccc
aaaggcgaccaaggtcccctcccgccttacgtcgatatacgtagtccaagtgattccaaa
atcgatagttccggcaaatgtggctgtaacgcgacaagtatcctagaattaataaaggcg
gacaccgtgagagaatcgttgcgaggacctcccggactgcctggaaaagaaggaaagact
ggcgcgcctggactcacgggtcccactggtacaccgggtgaacgcggtgcccccggtcca
aaaggtgaccgcggcgataggggcgatcccggtccacgtggtcccgagggtcttcagggt
cataaaggtgaacccggtgtggacggagctccaggactgcctggagttcctggtcctccc
ggagcacctggtctctcagatgcatacgatgagtctctcattggcaatgggatgcaaacg
cttcgcagcggaacgcccggagcaaaaggcgaacctggaactaaaggagagatgggtcga
cctggagaacggggacagcccggcgcgaagggcgatcgtggtgatccagggatgacaggt
gctaaaggtgaaagggggcacccagggccgcatggagcgacaggtttaaaaggtgaaccc
ggacagccaggaataccaggcttagcagggcctccaggagcgataggcaataaaggagat
agaggctcacaaggagaaataggtccaattggtccacctggacctccaggaactgtatta
tattccgatgctaaaaatgtaaccgaatgcacttgccaagctggtccgcctggacaacca
ggaccacgaggaccggcaggatttgatggcgaaccaggatcacctggtgaacccggtaca
gtaggcctaacaggtcttccaggtcaagtaggcgaaaaaggtgaaaagggagagaaagga
cttcgtggaccagctggtattaaaggtgatcgaggaccggaaggaccgccgggacgaagt
attttttcagcagatggcctcatgaatggtacaaagggagagaaaggagacaggggcttg
aaaggaaaacgaggtaaaccaggtcctcaaggaccaatgggaccgccagggcctccagga
ccgaaaggacacagcggcgacaccgggcttccaggaccttgggctgggacgggtcgacct
ggtccaccaggaccgaaaggcgaaactggacaaaaaggacaacgcggtgaaggggctaag
ggtgataaaggtgatcgagggacagacggcaaacctgggctgccaggaccaccgggatta
ccatctgccagtgatggagtacagttcataccagtcacaggaccgcctgggccaccaggc
ccccctggacctcctggaatcccgggactatcaataacaggaccaaaaggagaacccggg
ctcgaatcaaggactccatacttcggtgaccccgcttattacggcaaaccaggtggacgt
tctagtttagatgaaattaaagcgcttagagaacttcaaagtttgaaggagcttccggaa
agtacctctggtccaccgggacccccaggcccaccaggacctccatcgccgtcaatgagg
gcggaccatcaggactcctcatcaggcatgaagattgttccaggtgcagtgacattccaa
aatactgaagctatgacgaagatgtcagcattgagtcctgtcggaacaatagcctacata
attgaagaagaagcactgctagtccgagttaacaaaggatggcaatatattgcgctggga
agtttgttgcccatagtatcgcccgcgccaccaaccacaatagctcctccgccgagacct
gacctgcaggcatccagtttattgaacaacgcttcacaatttgtcgaaggacctaatttc
acgatgtcgccacagtatgaaacgtggtatccacgaatgttaagactggctgcgctcaat
gagccttacacaggagacctccaagggaatcgtggagcagattttgcttgttatcgacaa
gcaagaagagcaggcctactaggcacgttcaaagcactattgacagcaagggttcaaaat
ctggatgcgattgttcgtcctgctgatcgcgagcttcctgtagtaaatacaaagggagat
gtcctgtttaattcattcaaaggaattttcaacggccaaggaggattcttctcgcaggca
ccaaggatatatagttttaatgggaagaacgtgttaacggatctaacatggccgcaaaaa
atcgtgtggcacggatcactgcctaatggtgagcgagcgatggacacatactgtgacgcg
tggcaggagtcctccccggacaaagtaggtctggccagcagtctcctgggcaataaatta
ttggatcaggaacgttattcgtgtgataatcgatttgttgtcctatgtattgaagccctg
tcacaggatcgacgaaggaaacgagatttacgacaaagtgacgaaaacgaaatcacatca
gtggaagattacgaaaatcatctagaagaaatcttcagtataccgcactaa
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