Hermetia illucens (black soldier fly): 119652733
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Entry
119652733 CDS
T08287
Name
(RefSeq) CCR4-NOT transcription complex subunit 6-like isoform X1
KO
K12603
CCR4-NOT transcription complex subunit 6 [EC:
3.1.13.4
]
Organism
his
Hermetia illucens (black soldier fly)
Pathway
his03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
his00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119652733
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
his03019
]
119652733
Enzymes [BR:
his01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
119652733
Messenger RNA biogenesis [BR:
his03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
119652733
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
119652733
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
LRR_14
LRR_8
LRR_4
LRR_1
LRR_LRWD1
LRR_R13L1-DRL21
Motif
Other DBs
NCBI-GeneID:
119652733
NCBI-ProteinID:
XP_037912957
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All DBs
Position
3:14066752..14543622
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AA seq
587 aa
AA seq
DB search
MRGNSYKMSRNKDKYENNNTRRQQIFLSADELASGRKPVWHGVEITGNVRNLSPSLWNFT
HLTALYLNDNNLSRLPSDIGLLTNLRTLDVSSNKLRSLPAELGELIQLRELLLNNNYLRA
LPYEIGKLFHLNILGLHGNPLGKEFLSIYNEPNGTQRLLTFMLDNLSALYSWDYEKQAVR
FAVTPLPQRPWIPLARPNKSRPSCIFTVMCYNVLCDKYATRQMYGYCPSWALGWEYRKKA
ILDEIRHYSADIISLQEIETDQFYNFFKPELKNDGYEGIFSPKSRAKTMSEQERKYVDGC
AIFFRSSKFSLIKEHLVEFNQLAMANAEGSDNMLNRVMPKDNIGLAALLKVKESAWDPVT
PEVTQIAQPILVCTAHIHWDPEFCDVKLIQTMMLSNELKTILDEASHSFRPGHKFDTNSV
QLLLCGDFNSLPDSGVIEFLGSGRVSMDHQDFKELGYKSCLQRLLPSENSNEFTHSFKLA
SAYSEDIMPYTNYTFDFKGIIDYIFYTKTGMVPLGLLGPISAEWLRENKVVGCPHPHIPS
DHFPLLVELELMHTASAQPPNGLINRRYTQTTTNRINHTQIDKGHRT
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgagagggaactcttacaaaatgtctcgaaataaagacaagtacgaaaacaataataca
aggagacaacaaatattcttatcagcggatgagcttgcatcggggcgaaaacctgtttgg
catggagttgagataacaggcaatgttcgcaatttaagtccgtctctgtggaatttcact
catctcactgccctctatttgaacgataacaacttatcaaggctaccgagtgatatcggc
ctgttaacgaatctgcggacattggatgtctcttctaataagctgcgaagtttgccggcc
gaattgggtgaattgattcagttgagagaactactgttaaacaacaactatctccgtgca
ttgccctatgaaattggaaaactcttccatttgaacatacttgggttgcacgggaatcct
ctcgggaaggaattcctttcaatctacaatgaaccgaatggcacgcagcggctactaaca
tttatgctggataatctatcagctttatattcgtgggactatgagaaacaagctgtaaga
tttgcagtaacaccactaccacagagaccgtggatacctctagcaagacccaacaaaagt
aggccttcatgtatttttactgtaatgtgctataacgtactttgcgataaatatgcaaca
agacaaatgtacggctattgtccaagttgggcccttggttgggaatatagaaaaaaggca
atacttgatgaaatccggcattattcagctgatattataagcttgcaggagattgagacc
gatcaattttataatttcttcaaaccagaactgaaaaacgatggttatgaaggcatattc
tctcctaaatcaagagcgaaaacgatgtcagaacaagaaaggaaatatgtggacggttgt
gctatattttttagatcatccaaattttcgcttatcaaagaacatctagttgaattcaat
cagttggcaatggccaatgcagaaggttcagacaatatgttgaatcgtgtcatgcccaag
gataacatcggtcttgcagctctgcttaaggtcaaggagagtgcatgggatccagttact
cctgaagtaacacaaatcgcacaacccattctagtttgtaccgcacacattcattgggat
ccagaattctgtgatgttaagctaatccaaacgatgatgttaagcaacgaattaaaaacg
attctagacgaagccagtcatagttttcgtccaggacacaaatttgacacgaatagcgta
caattgcttctgtgcggcgattttaattcgttacccgattccggtgtcattgagttttta
ggttcgggccgcgtatctatggaccatcaagattttaaggagctcggctataaatcgtgt
ttgcaacgactattgccgagtgagaattcaaatgaattcacgcattcctttaaactagcc
tcagcctatagtgaagatataatgccctatacaaattacacgttcgattttaaggggatc
atagactatatattttatacgaagacgggaatggtcccgctcggtttgctcggtcctata
tcggccgagtggctgcgggagaacaaggtcgtcgggtgtcctcacccccatatcccatcc
gatcacttcccgttgctcgtcgagttggagctcatgcacacggccagtgcccagccgcca
aacggtctaatcaaccgcagatacacacaaacgacaacaaaccgaataaatcatacacaa
atagacaaaggacataggacatag
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