Hermetia illucens (black soldier fly): 119653236
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Entry
119653236 CDS
T08287
Name
(RefSeq) putative mediator of RNA polymerase II transcription subunit 26 isoform X1
KO
K10643
CCR4-NOT transcription complex subunit 4 [EC:
2.3.2.27
]
Organism
his
Hermetia illucens (black soldier fly)
Pathway
his03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
his00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119653236
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
his03000
]
119653236
03019 Messenger RNA biogenesis [BR:
his03019
]
119653236
04121 Ubiquitin system [BR:
his04121
]
119653236
Enzymes [BR:
his01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119653236
Transcription factors [BR:
his03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
119653236
Messenger RNA biogenesis [BR:
his03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
119653236
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
119653236
Ubiquitin system [BR:
his04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
119653236
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_4
RRM_1
RIN1
Baculo_IE-1
zf-UDP
Motif
Other DBs
NCBI-GeneID:
119653236
NCBI-ProteinID:
XP_037913753
LinkDB
All DBs
Position
3:176941040..176997495
Genome browser
AA seq
1139 aa
AA seq
DB search
MNVLNNNSDDVVECPLCMEPLEADDLNFYPCTCGYQICRFCWHRIRTDENELCPACRKAY
PENPADFTPLSQEQIAALKAEKRQRDQQRKQKITENRKHLANVRVVQKNLVFVVGLPPRL
ADADILKKHEYFGKYGKIHKVVINPSTAYAGQQGPSASAYVTYVHNNDALRAIQSVNNIA
IDGRLIKTSLGTTKYCSHFMKNQQCPKSDCMYLHELGDPEASFTKDEMHQGKHQEYEKRL
HEALIASSNGSVTTNSKSGDNKLGNGTGTVPSKEAWPSLSVSPVNTKEQPTKSNGKGNKE
GNRKHDKTRGDKKGQKNQKGRNDSSNNNSSSNHNKAEHNNNITNGVTTTSTNHHHQQNGT
TKDTSSQSQTTNDTGTRATTPGSTSTTSSNDKQPTKQQQQQQQQQQHQQHPAANHISADD
EVNLIDDLDKDTSSEDNDAKNGDTRSLSSSSSNSCNSGESGSTLSESTSGKSSPGSFPDH
PLAATPESQKTTTSSSSSSSSMTDTQGDLSSDSSITQQQQIPNSSADTNSSNTTNSSKSE
MSNITSIVTQSSDESTLIDTSACLSKLSLFDDNNSFFSPSFDQFFKEKLDNDNRTVINNQ
INNAITSQLPDLLSGIDGYQNQNTSSSILNGLSGIGGGLCGLGGLNPSTGANTTVSSNNS
FIDSPDKFILSTLNSAEEWEQALKILMMRSTKPMEEQQHQQQEEYLRLQELQKRNLMNTI
GMNPPHLHDFNGDFLHNGTDMNRLSQSHLYQQQQQQQQQQHRQPNNLHADHNSIFGTNMS
KFFDFHKNQQQQQMQHQHLLMNGYAMLNDHRDHLSMAALLENRMNSQHMEHTNGLIGQQL
QKQRIFNKFDQIGSHNSSNMLMNPNNNPQQQQNRIHNQYPQNAPVDDDLGFDPFFETQKA
LAEIMENEQSQNNHNKHLLESCQRTRMPPPGFNHMNAFGFGVPRPQGSKILPFMNNAQQQ
MPQQNNWPHHMGSFPQSQPPQQQQQQGNEQQMHMGQPNQNHNKAGYGNMSDWTAMDPAIL
SFRQFPSYPSHQQHDMFMHLNPQSGQGFGHHGQQMQNNMMNQQQQQQQQQQQQQNSAPQV
NYSHSNWFNNSNEQSMFMNSLGNGYTSNYEKFSLPPGIHINNMNNCISGNKQQKTECIN
NT seq
3420 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtattaaacaataacagtgatgatgtggttgaatgtccactgtgcatggaaccc
ttagaagctgacgatcttaatttctatccatgcacttgtggctatcagatttgtcggttc
tgctggcacagaattcgtactgacgaaaatgaattgtgtcccgcgtgtcgtaaggcatat
ccagaaaatccagcggattttacacctctatcgcaagaacagatagcagccttgaaagcg
gaaaaaaggcagcgtgaccaacaacgaaagcaaaaaattaccgaaaaccggaagcatttg
gcaaacgttcgtgttgtccagaagaatcttgtttttgtagtaggtctgccgccaagactg
gcagatgcagatattctaaaaaaacatgagtattttggaaaatacggcaaaatacataaa
gttgtgataaaccctagtactgcgtatgctgggcaacagggtccttcagcgtcagcgtat
gtcacatacgtacacaacaacgacgcattacgcgcaatacaaagtgttaacaatatcgct
atagacggtcgactgataaaaactagtttaggtacaactaagtattgtagccacttcatg
aaaaatcagcagtgtccaaaaagtgactgtatgtatttacatgaattgggcgaccccgaa
gctagttttacaaaagatgaaatgcatcagggcaaacatcaagagtatgaaaaacgattg
catgaagcgctgatagcatcgtcgaacggtagtgtaactacaaatagtaaaagtggtgat
aataaattaggtaatggtacagggactgtaccgagtaaggaagcgtggcccagtctttcg
gtatcgccggtcaatacaaaagaacagccaacaaaaagtaatggtaaaggtaataaggaa
ggtaatagaaaacatgacaaaacgagaggtgataaaaaaggtcaaaagaaccaaaaaggt
cggaacgatagctcgaataacaacagtagtagcaatcacaacaaggcagaacacaataat
aacataacaaatggtgtgacaacaacatctacaaatcatcaccatcaacaaaatggtaca
acaaaagacacaagtagtcagagtcaaacgacaaatgacacgggaacaagagcaacaaca
ccaggatcgacatctacgacatcatcaaatgataaacagccgacgaaacagcaacagcag
caacaacaacagcaacagcatcaacaacatccagcagcgaatcatataagtgccgatgac
gaggtgaatcttattgatgatctcgacaaggacacttctagcgaggataatgatgcgaaa
aatggtgatacaagatcgttaagtagttcatcgagcaacagctgtaatagtggtgagagt
ggttcaacgcttagtgaaagtacaagtggcaaaagttcaccgggcagtttcccagatcat
ccactagctgctacgcctgaaagtcaaaaaacgaccacatcgtcatcgtcgtcatcctcc
tcgatgacagatacgcaaggagatttaagttcagatagttcaataacacaacaacagcag
atacccaacagttcagcagatacaaattcgtctaacacaacaaatagcagtaagagtgaa
atgagtaatattacgtcgatagttactcaatctagtgatgaatctaccctaattgatact
tcagcatgcctatcgaaattaagtttattcgatgataacaatagtttcttctcaccatca
ttcgatcaattcttcaaagagaaattagataacgataatcgcacagttatcaataatcag
ataaacaacgccatcacatcacaactacccgatctacttagcggtatcgacggttatcaa
aatcaaaacacatcatcatcgattctaaacggtttgagtgggattggcggaggcctgtgt
ggtctgggaggtcttaacccatcgaccggagcaaataccacggtctcatcaaacaatagc
tttattgatagtcctgacaaatttatcttgtcaacgctcaattccgcggaggaatgggaa
caggctttgaaaattctaatgatgcgtagtactaagccaatggaagagcaacagcatcaa
caacaggaggaatatctacgattgcaagaattgcaaaaacgaaatctaatgaatacgatc
ggaatgaatccacctcatttacacgatttcaatggcgattttcttcataacggtacagat
atgaacagactatcacagtcacatttatatcaacaacagcagcagcagcaacaacaacaa
cacagacagcccaacaatttacatgcagatcataacagtatatttggtacaaatatgtcg
aaattcttcgatttccataagaatcaacagcaacagcaaatgcagcatcagcatttgtta
atgaacggatacgctatgctcaacgaccatcgtgaccatttaagtatggcagcattgcta
gagaataggatgaattcacagcatatggagcacaccaatggccttatcggacaacaatta
caaaaacagagaatatttaataaattcgatcaaattgggtcgcataatagtagcaatatg
ctaatgaatccgaataataatccacaacaacaacagaatcgtattcacaatcaatatccg
caaaatgcacctgtcgatgatgatttaggtttcgatccattcttcgagacacaaaaagca
ttggccgaaataatggaaaacgaacaatcgcaaaataatcacaataagcatcttttagag
agctgtcaacgaactcgtatgccaccaccaggttttaatcatatgaatgccttcggtttc
ggtgtgccacgaccacaaggcagcaaaattttaccgttcatgaataatgcgcaacaacag
atgccgcaacaaaataattggccacatcatatgggaagttttccacaatcacagccgcca
caacagcaacagcaacaaggcaatgaacaacagatgcatatggggcagccaaatcaaaat
cataacaaagcaggatatggcaacatgtctgattggacagctatggatccagctattttg
tcattccgtcaatttccatcgtacccgtctcatcagcaacacgatatgttcatgcatttg
aatccacaatcggggcaaggtttcggacaccatggacaacaaatgcaaaataacatgatg
aatcaacaacagcaacagcagcagcagcagcaacaacaacagaattcagcaccacaggtg
aactattcccactcaaattggttcaataattcaaacgaacagagcatgttcatgaatagt
ttagggaatggatacacaagtaattacgaaaaattctcattgccgcctggtattcatatc
aataacatgaacaattgcatttcaggaaataaacagcaaaaaactgaatgtattaattga
DBGET
integrated database retrieval system
