Hermetia illucens (black soldier fly): 119653714
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Entry
119653714 CDS
T08287
Name
(RefSeq) regulator of nonsense transcripts 1 homolog
KO
K14326
regulator of nonsense transcripts 1 [EC:
5.6.2.5
5.6.2.3
]
Organism
his
Hermetia illucens (black soldier fly)
Pathway
his03013
Nucleocytoplasmic transport
his03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
his00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119653714
03015 mRNA surveillance pathway
119653714
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
his03019
]
119653714
Enzymes [BR:
his01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
119653714
5.6.2.5 RNA 5'-3' helicase
119653714
Messenger RNA biogenesis [BR:
his03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
119653714
mRNA cycle factors
Common to processing body (P body) and stress granule
119653714
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF1_Zn_bind
AAA_12
AAA_11
UPF1_1B_dom
AAA_30
AAA_19
ResIII
SLFN-g3_helicase
DEAD
Helicase_RecD
AAA_22
NPHP3_N
ATPase
UvrD-helicase
nSTAND3
SRP54
AAA_16
AAA_5
AAA_7
AAA_10
PhoH
AAA_32
Motif
Other DBs
NCBI-GeneID:
119653714
NCBI-ProteinID:
XP_037914523
LinkDB
All DBs
Position
4:complement(21942267..21954808)
Genome browser
AA seq
1103 aa
AA seq
DB search
MSVDTYGPSSQTLTFLDTDENDLIGADTQGTDFDFRDFDLPSQSQTQASQMDPLTGASQM
NGLGRRLEVHNNISAITNGIAELQFEDEDEESVMPLKELPKHACKYCGIHDPGTVVMCNI
CKKWFCNGRGSTSGSHIVNHLVRAKHREVTLHNEGPLGETVLECYSCGVRNVFVLGFIPA
KADSVVVLLCRQPCAAQNSLKDMNWDQEQWKPLISDRSFLTWLVKIPTEQEQMRARQISA
AQINKLEELWKDNIEATFQDLEKPGIDAEPAQVLLRYEDGYQYQKIFGPLVQLEAEYDKK
LKESQTQENIEVRWDVGLNKKTIAYFTLAKTDGDMKLMHGDELKLRYVGELHKPWNGVGH
VIKVPDNYGEDVGLELKVGQGAPIECTSNFAVDFIWKCTSFDRMQLALRKFAMDDNSVSN
YIYTKLLGHGRPDGTDEITLRGNLPKHFSAPNLPDLNRSQVYAVKHAIQRSLSLIQGPPG
TGKTVTSATIVYQLVKQNGGTVLVCAPSNTAVDQLTEKIHRTNLKVVRVCAKSREAIDSP
VSFLALHNQIRNMDTNVELKKLQQLKDETGELSSADEKRYRVLKKASERELLEAADVICC
TCVGAGDPRLARIKFSSILIDESMQSTEPECMVPVVLGARQLILVGDHCQLGPVVMCKKA
AKAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSEFPSNFFYEGSLQNGVCADERKLKVD
FPWPQNDRPMFFLVTQGQEEIAGSGTSYLNRTEASNVEKITTRFLKAGVKPEQIGIITPY
EGQRAYLVQYMQYQGSLHSKLYQEIEIASVDAFQGREKDIIIMSCVRSNEHQGIGFLNDP
RRLNVALTRAKYGIIIVGNPKVLSKQPLWNHLLSFYKERKVLVEGSLNNLKESLIQFQKP
KKIVNTLNPGTHFMSNVMYDAKEAMMPGSLYDKSGALGYAHPPQPPVNQMGYQARNIPLE
MFHRAHRDSISYISPEHAQAANMPVPVGIFMNMNNIPPRFYNRQQQAIQAVKQGRRPVSK
PTKTQMSRVRGASQVGGPLTQQGMSQNMSQPGFSLSQQPELSQDYGQISQMEGILSQDST
YQGHVGERMAFGLTNPNQYSQPY
NT seq
3312 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtggacacgtacggacccagctcccagacgctgaccttcctcgacacagacgag
aatgacctcatcggggccgacacgcagggaacggatttcgattttcgcgacttcgatctg
ccgtcgcagagccagacgcaagcatcacagatggatcctttgacgggagcgagtcagatg
aacggcttaggcagacgcctcgaggtgcacaacaacatctcagccattaccaacggcata
gccgagctccaattcgaggacgaggatgaggaatcagtgatgcctttgaaagaactaccg
aaacacgcttgtaaatattgtggcattcatgatcccggcaccgtggttatgtgtaacatt
tgtaaaaagtggttttgtaatggtcgcggaagtacatccggatcgcatattgttaatcat
ttagttcgtgccaagcatcgggaagtaaccctacacaatgaaggcccattgggcgaaact
gttctggaatgttattcatgtggtgtgagaaatgtatttgttttgggtttcattccggcc
aaagctgactccgttgttgtattgttatgtcgccagccatgtgccgctcaaaactcccta
aaggacatgaattgggatcaagagcaatggaagccgctaatatcggatcgatcgttccta
acgtggctcgttaaaatccccacagaacaggagcagatgcgagcccgtcaaatctcggcc
gcacaaatcaacaaactcgaagaactgtggaaggacaacatcgaagcgacgttccaagat
ctagaaaaacctggaatcgacgcggaaccggcacaagttctgcttcgctacgaagacggt
tatcaatatcagaaaatcttcggtccattggttcagctcgaagcggagtatgataagaaa
ttgaaagagtctcagacacaggaaaacatcgaagttcgctgggacgtgggattgaataag
aaaactatcgcctacttcacattggcgaaaactgatggtgatatgaaacttatgcatggg
gacgagttgaaattgcgttatgttggcgaattgcataaaccctggaacggtgttggacat
gttatcaaagtcccagacaactatggcgaagatgtaggattagaactgaaagtaggccaa
ggagcgccgatagaatgcacatcgaactttgctgttgactttatctggaagtgtacgtct
tttgatcgaatgcaactggcgctacgcaaattcgccatggacgataactctgtttccaat
tatatttacacaaaattgctaggccatggccgtcctgatggcactgacgagataaccctg
cgtggaaatctaccaaagcacttcagtgctccaaatctaccagatctaaatcgttctcag
gtttacgctgtgaaacatgcaatccaacgatccttgagcttgatccaaggacctccaggc
acgggaaaaacagttacttctgcaacgattgtctatcagcttgtcaaacagaatggtggc
accgttctggtatgcgctcccagcaacacagccgtcgatcagcttaccgagaaaatccat
cgcaccaatttgaaagttgttcgtgtctgtgccaagtctcgggaagccatagacagtcct
gtaagtttcctggcactgcacaatcaaatccgcaacatggatactaacgttgaattgaaa
aaactacaacaactcaaagatgagacaggcgagctgagttcagcggatgagaagcgttat
cgagtgctgaaaaaggcgtcggaacgagaactccttgaagccgccgatgtgatttgttgt
acttgtgtaggtgctggtgatccccgcctggctcgaatcaagttctcttctattttgatt
gatgaaagcatgcagtcgacggagcctgaatgtatggtccctgtggtgctaggcgcccga
cagttgatccttgtcggcgatcactgccagctgggacccgttgtgatgtgtaagaaagct
gcaaaggctggattgtcgcaaagtttattcgaacgcctggtcgtgctagggattcggcca
ttccgccttgaggttcaataccgtatgcacccagaactctcggaattcccttcgaacttc
ttctacgaaggcagccttcaaaatggagtgtgcgcggatgaaaggaagttgaaagtagat
tttccctggccacaaaatgaccgtccaatgttcttcctagttactcaaggtcaggaggaa
atcgccggctcgggaacgtcgtacttaaatagaacggaagcctcgaatgtggagaagatc
accacgagatttttgaaggctggcgtgaagccagaacagattggcattattacaccgtat
gagggacagcgagcgtacttagttcaatatatgcagtaccagggaagtttgcactcaaag
ttgtatcaggagattgaaattgcgagcgttgatgctttccaaggacgtgagaaggatatt
attatcatgtcttgtgtgagatcgaatgagcatcaaggcattgggttcttgaatgatcct
aggaggttgaatgtggcattgacacgggctaagtatggcattattatcgttggaaatcct
aaggttttgtcgaaacagccgctgtggaatcatttgcttagtttttataaggagcgcaaa
gttttggtggagggatcgctaaataatttgaaagagtcgcttattcagttccagaagcct
aaaaagatagtgaacactttgaacccgggcactcatttcatgtccaatgtcatgtacgac
gcaaaagaggcgatgatgcccggttcgctttatgacaaatccggtgccttaggctatgcc
catcctccgcaacctcccgtcaaccaaatgggctaccaagctcgcaatatacccctggaa
atgttccatcgtgcacaccgcgactctattagttacatttccccggaacacgcccaagcc
gctaatatgcccgtacccgtgggcatcttcatgaacatgaacaatattccgcctcgattc
tacaatcgccaacagcaggccattcaggcagtgaaacagggacgtcgaccagttagcaaa
ccgactaaaactcaaatgtcgagggtacgaggagctagccaagttggcggaccgcttact
caacaaggaatgtcgcagaatatgagccagcctggtttcagcctttcgcaacaacccgaa
ctgtcacaggactatggtcagatatcgcaaatggaggggatcttgtcacaggattccaca
tatcagggccacgttggcgagagaatggctttcggtctaacaaatccaaatcaatactcg
cagccatactga
DBGET
integrated database retrieval system
