Hermetia illucens (black soldier fly): 119654352
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Entry
119654352 CDS
T08287
Name
(RefSeq) ATP-dependent RNA helicase DDX42
KO
K12835
ATP-dependent RNA helicase DDX42 [EC:
5.6.2.7
]
Organism
his
Hermetia illucens (black soldier fly)
Pathway
his03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
his00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119654352
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
his03041
]
119654352
Enzymes [BR:
his01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
119654352
Spliceosome [BR:
his03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
119654352
Complex B
119654352
Complex C
U2 SnRNP specific factors
119654352
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
P-loop_SecA
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
119654352
NCBI-ProteinID:
XP_037915624
LinkDB
All DBs
Position
4:87692218..87695410
Genome browser
AA seq
787 aa
AA seq
DB search
MSYRGIGGGGFPYRKSEISDKSGYSMNAVPPPSTLNSGRSAGGFANRNLVPQTGGGLSKH
GYSTMDAISQFANSSQYALGKRKSRTEDEYFDEEDETTPDLAYIPAPGSPTASQPQQKAV
DSSDEDDDPLDAFMAGIEKQVEKEKKIAENPNVEHKSKGIRADIDDEDDEESYYRYMEEN
PLAGVQDDGSDAEIEYDEDGNPIAPPRKRDIDPLPPIDHSEIDYESFEKNFYNQHEDIAK
LTPQQVADLRRTLGVKVTGPVPPNPVTSFAHFGFDEPLMKAIRKSEYTQPTPIQAQAIPA
ALSGRDIIGIAKTGSGKTAAFIWPMLVHIMDQRELKPGEGPIALVLAPTRELSLQIYNEA
KKFGKVYNIHVVCAYGGGSKWEQSKALEQGAEIVVATPGRMIDMVKIKATNLKRVSYLVL
DEADRMFNMGFEPQVRSICNHVRPDRQTMLFSATFKKRIEKLARDVLTDPIRIIQGDLGE
ANEDITQHVLVFSNPHHKWNWLLCKIVEFQSQGSILIFVTKKLDAEQVANNLKLKEFDCV
LLHGDMDQADRNKVITRFKRKECDIMVATDVAARGLDIPHIRTVVNYDIARDIDTHTHRI
GRTGRAGEKGTAYTLVVEKDKEFAGHLVRNLEGANQEVPNALMELAMQSSWFRKSRFKSG
KGKKLNIGGAGLGYRERPGLGASSNSYSSSEGHSQKSQSAQPASAPSPVSASGPASDRLS
AMREAFRSQYNTQFRASSDRTWEKTVPESGVFLAPALPGGMTPPAPRPPAASDGSDSTKK
KKRSRWD
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgagctatcgcggtatcggtggcggtggtttcccatacagaaaatcggaaatttccgac
aagagtggctattctatgaacgccgttccgccaccgagcaccttgaatagtggtcgctcg
gctggtggttttgctaatcgaaatttggtaccacagaccggtggaggtttgtcgaaacat
ggatattcaacaatggatgccatttcgcagttcgcgaactcttcgcaatatgcgctgggg
aagagaaagtctcggacggaagacgagtattttgacgaggaggacgaaacaactccagat
ctagcgtacattccggcgccggggagtccaaccgcatcccagccacagcagaaagctgtt
gacagttcagacgaggatgatgatccgcttgatgctttcatggccggcatcgagaagcag
gttgaaaaggagaagaaaatcgcagagaatccgaacgttgagcacaaatccaaaggcatt
agagcagacatagatgatgaggacgatgaggagagctattatagatatatggaagaaaat
cctttggctggggtacaagatgacggatcagatgcggagattgagtacgacgaagacggt
aatccgatcgcgccgcctcgaaagcgcgacatcgaccctctaccgcctatcgaccattct
gagatcgactatgagtcttttgagaaaaatttctacaatcagcatgaagatattgcgaag
ttgactccacaacaagtagctgatcttcgtcgtacgttaggcgtgaaagtgacgggtcca
gttccgccaaatccagtgacgagttttgctcatttcggattcgacgaaccgcttatgaag
gccatccgtaaatcggaatacactcaacctactccaattcaagcgcaagcaatacccgcc
gctctgagcggtcgtgatattattggcatcgcaaaaactggtagtggaaagacagcggcg
ttcatttggccgatgctcgttcatataatggaccaaagggagctgaaacccggggaagga
ccaatcgctctggtgttggcgccgacgcgtgaactgtcacttcaaatctacaacgaggcg
aaaaaatttggcaaggtttataatattcacgttgtatgcgcgtatggtggcgggtcaaaa
tgggagcagagcaaagcattggagcagggagcagaaatcgtcgtcgcgactccaggtcga
atgattgatatggttaagatcaaagcgacgaatttaaagagagtgtcatatcttgtcctc
gatgaagctgatcggatgttcaacatgggatttgaaccacaagtccggtcgatttgtaac
cacgtccgtccagaccgtcaaaccatgctattttccgctacattcaagaaacgcatcgag
aagctagctcgcgacgttttgaccgatccaatccgaattatccaaggcgacttaggagaa
gccaacgaagatataacccaacacgttctagtcttctcaaatccacatcacaaatggaac
tggctactatgcaaaattgttgagttccagtcacaagggagcattttgatatttgtgacg
aagaagctcgatgccgaacaagttgccaataatttaaagttgaaggagttcgattgcgta
ctgttgcacggtgacatggaccaggcggatcgtaacaaggtgatcacgcgtttcaagcgc
aaggaatgtgatatcatggtggcaacagatgtggctgcacgtggtttagacattccacat
attcgaacagtggtcaactacgatatcgctcgtgatattgacacacatacacatcgaatc
ggccgaacggggcgagcaggtgaaaagggaacagcttacacattggtcgtggagaaagac
aaagaatttgccggccatttggtacggaacttggaaggtgcaaatcaagaagtaccaaat
gccttgatggaacttgccatgcagagctcatggttccgtaaatcaagattcaagagcggc
aagggtaaaaagctgaatattggaggagctggtttaggttatagagaacgtccaggttta
ggcgcatcaagcaattcatattcttcttctgagggtcattcacaaaagagtcaatccgca
caaccggcaagcgctccttcgccggtaagtgcttcaggaccagcaagcgatcgtctttcg
gccatgcgggaggcttttcgcagtcagtataacacccagtttcgagcgtcaagcgatcgg
acatgggagaagactgtaccagagtcaggtgtgtttttggcaccagctttacctggggga
atgactccaccagcacccagaccgcctgctgcatcggatggttcagattccaccaagaag
aagaagagaagtcgatgggattag
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