Hermetia illucens (black soldier fly): 119655504
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Entry
119655504 CDS
T08287
Name
(RefSeq) pre-mRNA-splicing factor syf1 homolog
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
his
Hermetia illucens (black soldier fly)
Pathway
his03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
his00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119655504
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
his03019
]
119655504
03041 Spliceosome [BR:
his03041
]
119655504
Messenger RNA biogenesis [BR:
his03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
119655504
Spliceosome [BR:
his03041
]
Complex B
Other components
Prp19-related factors
119655504
Complex C
119655504
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
HAT_PRP39_N
TPR_14
TPR_2
Suf
TPR_8
TPR_12
Mad3_BUB1_I
TPR_15
ARM_TT21
RPN7
PPR
TPR_10
TPR_7
ARM_TT21_C
DHR-2_Lobe_A
Mad3_BUB1_I_2
Motif
Other DBs
NCBI-GeneID:
119655504
NCBI-ProteinID:
XP_037917335
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All DBs
Position
4:2268953..2280637
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AA seq
855 aa
AA seq
DB search
MTVDKASESMNMDIDFPEEDVPYEEEILRNAYSVKHWLRYIDHKSKAPNNGVNIVFERAL
KELPGSYKIWYNYLRTRRKQVRGKCLTDPMYEEINNCFERALVFMHKMPRIWMDYGVFMT
GQCKITRTRHVFDRALRALPITQHHRIWPLYIDFLKKFDITETAVRVYRRYLKLFPEDAE
DYVDYLSSVGRLDEAAQQLANIVDNENFVSKHGKSNHQLWNELCELISKNPDKVHSLNVD
AIIRGGLRRYTDQLGHLWNSLADYYVRSGLFDRARDIYEEAIQTVTTVRDFTQVFDAYAQ
FEELSLSKRMEDVANDPDSTEEDDIDIELRLSRFEYLMERRLLLLNSVLLRQNPHNVHEW
HKRVTLYESKPEEIINTYTEAVQTVQPRLAVGKLHTLWVEFAKFYEKNGQVDDARVVFEK
ATQVEYVKVDELASVWCEWAEMEIRQRKYENALKLMQKATVLPKRKVAYHDDTEPVQMRV
YKSLKLWSMYADLEESFGSLKTCKAVYDRIIDLKICTPQIIINYGLFLEEHNYFEEAFRA
YEKGISLFKWPNVYDIWNSYLTKFLKRYGGTKLERARDLFEQCLESCPPEYAKNFYLLYA
KLEEEHGLARHAMAVYERATTAVRSEEMFNMFNIYLKKAAEIYGLPRTRQIYEKAIEILP
EDNAREMCTRFAEMETKLGEIDRARAIYAHCSQFCDPRITAEFWQTWKEFEVRHGNEDTM
REMLRIKRSVQATYNTQVNMMAAQMVNSTAGTVADLAPGVKDGMRLLEAKAAELSKQQAQ
KAQQNSNIMFVRGETQGIGEKDKVVNPDEIDIGDESDEEEEDEGDVDVMKNVPIEKQSIP
AKVFGSLKSVVDEEE
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtcgacaaagcttctgaatccatgaatatggacattgacttccccgaggaggac
gtcccttatgaagaggaaatccttcgaaatgcctactccgtgaagcactggctacgctac
attgaccacaaatccaaagcgcccaacaatggtgtgaatatagtctttgaacgagccctc
aaggagctgccgggctcctacaaaatttggtacaactacttaaggactcgccggaagcaa
gtgcgcgggaaatgtctgacggatccaatgtacgaggaaatcaacaattgcttcgaacgc
gcgctggtcttcatgcataaaatgccacggatatggatggactatggcgtgttcatgacg
ggacaatgtaaaatcactcgcacgcgacatgtcttcgaccgggctctgagggcgcttccg
atcacacaacatcatcgcatttggccgctttacattgactttttgaagaagttcgatatc
actgagaccgcggtgagggtttacaggagatacttgaagttgtttccggaggatgctgag
gactatgtggactacctgagctcggtggggcgactggatgaggcggcgcaacagttggcg
aatatcgtggacaatgagaactttgtctccaagcacgggaaatctaatcatcagttgtgg
aatgaactctgtgagctgatatcgaaaaatccagataaagtacattcactgaatgtagac
gccatcattcgaggagggctaagaagatataccgaccagctaggtcacttgtggaactct
ctagccgactactacgtccgcagcggtttgtttgatcgagctcgggatatctacgaggaa
gccatacaaacagtgacaactgtccgagattttacacaagttttcgatgcttacgctcaa
ttcgaagagttaagtctgagtaagagaatggaagatgtcgccaatgaccccgattcaacc
gaagaagacgatatagacatcgagttgcgtttatctagattcgagtatttaatggagcgg
cgtctacttctcctaaacagtgtcctgcttcgtcagaatccacacaatgttcatgaatgg
cataaacgagtgacattgtacgaatcaaaacctgaagaaatcatcaatacatacacagaa
gctgtacaaaccgtgcaacctcgattagctgttggaaaactgcacacattatgggtggaa
ttcgcaaagttttacgagaaaaatggacaagttgatgatgccagagttgtttttgaaaag
gcaacccaagtggaatacgtgaaagttgatgaattggcttcagtttggtgtgaatgggct
gaaatggagattcgacagaggaagtatgaaaatgccttgaaacttatgcaaaaagcgacg
gttttgccgaagagaaaagttgcatatcatgacgataccgagcctgttcagatgagagtc
tacaaatctttgaaattatggtcaatgtacgccgatctggaagagagttttggatcatta
aagacatgcaaggctgtttacgatcggataattgatttgaaaatttgtacacctcaaatt
atcatcaattatggtcttttcttggaagaacacaattattttgaagaggcattccgtgcg
tatgaaaaagggatctcgttattcaaatggccaaacgtttatgacatttggaattcatac
ttgaccaaattcctgaaacgttacggtggtaccaagctagagcgagctcgagatttattc
gaacaatgtctggaaagttgcccgccggaatatgcaaagaatttctatttgttgtatgcg
aaactagaggaggaacacggtttagctcgtcacgccatggctgtatatgaacgcgcaaca
actgcagttcgaagtgaggaaatgtttaacatgtttaatatttatctgaaaaaggcggcg
gaaatatatggtctgcccagaacgcggcagatttacgagaaggccatagaaatccttccc
gaggacaatgcaagagaaatgtgtacgagattcgctgaaatggagactaaattgggtgaa
atcgatagagcccgagcgatatatgctcattgcagtcaattttgtgacccgcgaattacc
gccgagttctggcaaacctggaaggagtttgaagttcgtcacggcaacgaagatacgatg
cgtgaaatgttacgaattaaacgcagtgtccaggccacttataatacgcaggttaatatg
atggcagctcaaatggttaactcaacggctggaactgttgctgacctcgctccgggagtt
aaggatggtatgcgattgcttgaggctaaggctgcagaattgtccaaacaacaagctcaa
aaggcgcaacagaatagtaatatcatgtttgttcgtggcgagactcaaggtattggagaa
aaggataaagttgttaatccggatgagattgatattggcgatgagagtgatgaagaagaa
gaggatgagggagatgttgatgttatgaagaatgtaccgatcgagaaacaatctataccc
gctaaggttttcggtagtctgaagagtgttgtggatgaagaagaataa
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