Hermetia illucens (black soldier fly): 119655899
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Entry
119655899 CDS
T08287
Name
(RefSeq) symplekin
KO
K06100
symplekin
Organism
his
Hermetia illucens (black soldier fly)
Pathway
his03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
his00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
119655899
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
his03021
]
119655899
03019 Messenger RNA biogenesis [BR:
his03019
]
119655899
Transcription machinery [BR:
his03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
119655899
Messenger RNA biogenesis [BR:
his03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
119655899
U7-dependent histone pre-mRNA processing factors
119655899
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Symplekin_C
SYMPK_PTA1_N
HEAT_2
Motif
Other DBs
NCBI-GeneID:
119655899
NCBI-ProteinID:
XP_037917982
LinkDB
All DBs
Position
4:52874069..52897573
Genome browser
AA seq
1152 aa
AA seq
DB search
MSGLLNRTPFLEESAVLFTDQKVTDARAKIVEWLNTAAMGSTTEKCDSLAKIQEIILNTQ
VDLIEEFTENILCFSQDPVQDVRRAVVGFIEQICKVKIEYLPRVVNILAMLLRDSSPQVI
KRVIQACGSIYKNALKWICSNIEITEEVEQAWNTMSLIKAEIVDMIDHDNDGIRTNAVKF
LEGVVILQTYADEDSMKRSKDFSLEDVPITLKIARRRKLEVEALNIFDCLLKFHGASHIS
SVNLIACTGTLCTIAKLRTSLMKPVVDAIKNLLSNLPPTLTDSQVSSVKKNLKMQLLNLL
KNRGSIDMQHIIVALLQDLGASIQEISRAIPKIDKQEQQRRAKRNLENANETSSAKRTKV
EAPIPIDSRPMEIDYDELDQQKLRSNKLNEKFIADHLNNLETVVQLVMASITSLPNEIPT
FFTNSYKPIVNMSKAQQITKIASMLAEQMTESRIGPGTSAFTKEPPMRLCAQTDDDDIIT
TESRTVGEESPIIDLEMAERDEGVKNSGDIRKEEATKKLRETMERAKGEALLQRMKQRVK
TLKLQEITKPLSKQAKEQFMLDAISRILKAEWQCVKGGVSVKRRKILTVMAATFPDNVRE
VILNFIMADLKNRIELAFSWLYEEYCLLQGFTRHSYIKTEHKPDHAYNKLFSQLVAGTIA
KKETKEKVILLRRIYLESPILPDDSITNLISMCELEEMSFHCLELVKDLAVRRPTRRSRF
LNILLTYSVHENGALRERALESVISLYVTHKVLTNKVDEFALEWLKFLEAEKPPAQMFSA
EYGRPEAVLVWNEDLIKICLTVVLALMPYHEDMIHNLSEVYIVATSDIKRIILRAVEAPV
KKMGPDNAQILKLIEQCPKGVETLITRIVHTLTEKSSPTLELVSRVRELYQNKVNDVRIL
IPVLSGLTKSEILAALPKFLKLNPVVVKEVFNRLLGVGPEFSSQTIPVTPNEILLALHTI
DISKCELKYVVKATSMCLAEKDVYTQDVLASCLQQLVEITPLPTLLMRTVIQSLTLYTRL
TTFVVNLLQRLILKQVWKYKVIWDGFLKCCQRLKPQSYPVLIQLPLAQLQDTLTQCPDLR
QPLVEYAEAINQNQGGHISQQIMDVLTGNSQDVFVTDESLGYIQIENIKKEKEDYVEMPT
PTRGQPLPPGED
NT seq
3459 nt
NT seq
+upstream
nt +downstream
nt
atgtcggggcttctgaacaggacgccctttctcgaggagtccgccgtacttttcacggac
caaaaagttacggatgccagagcaaagattgtagaatggctcaacacggcggcaatgggg
agcaccacggaaaagtgcgattcgttggcgaagatccaggaaatcatcttaaacacacaa
gtggatctgatcgaggagtttacggagaatattctttgcttctcgcaagatcccgtgcag
gacgtacgccgagcagttgtcggatttattgaacagatttgtaaagtcaaaatagaatac
cttccgcgggtagtgaatatcctggcgatgttgttacgagactcctcgccacaagttatc
aaacgtgtaattcaggcgtgcggctcaatctataagaacgccctgaaatggatttgctcc
aacatagaaatcacagaggaagtggagcaggcgtggaatactatgtccttgataaaggcg
gaaattgttgacatgatcgaccacgataacgatggtatacgaacgaatgctgtgaagttc
ctagaaggtgtcgttattctccaaacctacgcagatgaggacagcatgaaacgaagtaaa
gacttttcgttggaagacgttccaataacactgaagatcgcacgcaggcgtaagctagaa
gtggaggcattaaatatattcgattgcttattaaaatttcatggggcatctcatatttct
tcagtaaatttgattgcttgcactgggactctttgcactattgccaaactgcggacatcc
ctaatgaaaccggttgtagatgctataaaaaatttgctgtcgaaccttcctccaacatta
acagattcacaagtcagttccgtaaagaaaaacttaaaaatgcaacttttgaatctactc
aaaaaccgtggttcgatcgatatgcaacatatcattgtagcactcctccaagatttggga
gcttccatacaggagatttcccgagcaatcccgaaaattgataagcaagagcaacagcga
cgtgcaaaacgaaatttggagaatgccaatgaaacgtctagtgcaaagcgaactaaggta
gaagcgcccattccaattgattcacgaccaatggaaatagactacgacgaattagatcag
caaaaactccgatcgaacaaactcaacgagaagtttatcgcggatcacttgaataactta
gaaacagtcgtgcaacttgtgatggcttcgattacaagtctacccaatgaaattccgact
ttcttcacaaatagttacaagccaattgtaaatatgtcgaaggcgcagcaaataacgaaa
attgcttcaatgctggcggagcaaatgaccgaaagccgcatcggtcctggaacttccgca
tttacgaaagaaccgccgatgcgtttatgtgcgcaaacggacgatgatgatattattacc
actgagtcaaggacggttggggaagaaagtccaatcattgacctggaaatggctgaacga
gatgaaggtgttaaaaattcaggagatattcgaaaggaggaggcgacgaagaaattacgg
gaaacaatggaaagagcaaagggggaagctttgcttcaacgcatgaaacaacgcgtgaaa
actttgaaattgcaagaaatcacgaaacctctatcgaagcaagcaaaggagcagtttatg
cttgatgcaatatcacgcattctgaaagcggagtggcaatgcgttaaaggcggggtctcg
gtgaaacgtcgaaaaatcttgactgttatggcagctacatttcctgataacgttcgcgaa
gtaattttgaactttattatggcagatctcaagaatagaattgaattggctttttcgtgg
ctttatgaggaatactgtctacttcagggatttacacggcattcgtacatcaagacggag
cataagccagatcatgcgtataacaaattattcagtcaattagttgcaggaaccatagcc
aaaaaagaaacgaaggagaaagttattctgctccggcgaatctacttagagtcaccaata
ctgcctgatgattcaattaccaatctgatctcaatgtgcgagctcgaagaaatgtctttt
cattgcttagaattagtgaaagatttggctgtgcgaagaccgacgagaagaagtcgtttc
ctgaatattttgcttacttatagtgtacatgagaacggtgctcttcgcgagagggcctta
gaaagtgttatttcgttgtatgttacacataaagtccttactaataaggtagacgaattc
gctttggaatggctcaagtttttggaagctgagaaacccccggctcagatgttcagtgcg
gaatatgggcgaccggaagcagttctcgtctggaacgaggatttgataaaaatttgtttg
actgttgttcttgctttgatgccatatcatgaagacatgattcacaatcttagtgaggtt
tacatagtagcgacatctgacatcaaaagaataattctgcgtgcagtggaagcgccagtc
aagaaaatgggaccagacaatgcgcaaatattaaaactcatcgaacaatgcccgaaaggc
gttgagacactcatcacaagaattgtgcacacgttaaccgaaaagtcgtcaccaacatta
gaattagtttcgcgtgtcagagagctctatcaaaacaaagtgaatgatgttcgaattcta
atccccgtcctgagtgggttgactaaatccgaaatcttagcagctctgcccaaattttta
aaactgaatccagttgtcgtcaaggaagtattcaaccggttgctgggtgttggcccggag
ttctcgtcgcaaacaattccggtgacaccaaacgaaatacttcttgctctgcacacgatc
gacatatccaagtgcgagctgaagtatgtggtgaaggctacctcgatgtgtttggctgag
aaagatgtttatactcaggatgtgttagcttcgtgcctacaacaattagtggaaattacc
cccttgccaacactgctcatgaggacagttatccaatcgctgacgctgtacactcgtttg
accacgttcgttgtgaatcttttgcaacgtttgattttgaagcaagtgtggaagtataaa
gtgatttgggatggatttttgaaatgctgtcagcgcttgaagccgcagtcttatccggtt
ctgatacagctgcccttggctcagctccaagacactctaacacaatgtccagacttgcgg
cagcctctcgttgaatacgcggaagcaataaatcaaaaccaaggtggtcacatttcacag
caaatcatggatgtattgacaggcaattcacaagatgtttttgttacggatgaaagcttg
ggatacatccaaattgagaatatcaaaaaagagaaggaagattacgtcgaaatgccgact
ccaactcgtggacaacccctcccaccaggagaagactaa
DBGET
integrated database retrieval system