Hermetia illucens (black soldier fly): 119656260
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Entry
119656260 CDS
T08287
Name
(RefSeq) DNA repair protein RAD50
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
his
Hermetia illucens (black soldier fly)
Pathway
his03440
Homologous recombination
his03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
his00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
119656260
03450 Non-homologous end-joining
119656260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
his03032
]
119656260
03400 DNA repair and recombination proteins [BR:
his03400
]
119656260
DNA replication proteins [BR:
his03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
119656260
DNA repair and recombination proteins [BR:
his03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
119656260
BRCA1-C complex
119656260
NHEJ (non-homologous end-joining)
MRX complex
119656260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
SMC_N
SbcC_Walker_B
AAA_15
AAA_29
AAA_21
ABC_tran
AAA_16
YdjO
AAA_22
Motif
Other DBs
NCBI-GeneID:
119656260
NCBI-ProteinID:
XP_037918605
LinkDB
All DBs
Position
4:complement(134391177..134408893)
Genome browser
AA seq
1302 aa
AA seq
DB search
MSTIEKLSIRGIRSFGAKAEDEQIITFTSPLTLILGENGCGKTTIIECLKYALTGDTPPG
SEKGKSFVHDPKIFNATECLGQVKLMVKTLRGEKYTVCRSMKYSFKRSKPTFETLDGTIC
LDFQGQKAAISKRCADINAEMCHYMGVSKAIINNVIFCHQEESSWPLDEGKKLKEKFDAI
FGTTEYNKAIEKMIKLRKVQMDELKTKEADLKVLAHVKATTDSKNLELQQAQKKLDNLKE
MRNRLEEDMKPIQDRLTKIFTIEREISELTAKKIEYETRLKNSKEQAKNLQSKIKNIFEG
NLSMLDEEIRSFRENMNDKKNQLQNVEEKLQAIKFEEKKLQNAFTDLDRRRTSLIHQRRQ
EQDYLSERAQKIIELCKLLKIDVDDDIEERPNDVQEALKKIETAFVKEEKRISEMSARND
KVDQELQQEIDKLRENKASIESDIVSKKDQKKQLDRDRQKNLNEINQIEKSAQMLQTLTR
EIEKISKTYDDYSASVDLEGIKKIIAEKKANVNKFQETVEKLDEKITFLNSISKQTGEIS
LKEKELEKRETEMRRVKNKHSDNLKKLFPSREISSNYKRNVQNLYDSLQKQISDLNKSIN
LGKLKEKELQITRKNQKDEITKFEKELEKCEDRIYEKCHSSDYDGLLARSKENIDKIQME
YGALKSAEAMYKKYIQKIEDDPCCPLCHKDMQPNEAADLSAELSDEIRRLPENIQRTEEQ
LIKEQRKYEELLSLKPVIEKVQTLKTDIPKCKDKLKTTEEKLSETTNDVESNQMLTAEPQ
AHIELVNAILGDMSLLDEAIKDAARLQSELEKLKAKLPSYDTNLSLDDLQLEKTTVSAEL
KADRSKVDELQAQYERESDTLNQLREKRNSLKDKQIKLQEGVQALTQLKSRRDEIAAQIG
KIDKELFELEEKLKPLKAELSSAVDKKQRTKETNRKMLNTETAKIESWKKIDGEIKRYTK
ELQVLAELNLAQEIENLKNTLKRHTDEQAEKEKEKSDTTTAIENLKTDIRNQELVERDLK
DNRELKTLQEKVELLQIQYDDLRKDMGERDFKNVAREKDELTKKQDNIRIKKGEILGQMG
EVQNQVNNLTKELNQPQYKNCVKNYRKSYYEVEILKKVIHDLAEYRLALERALMQFHSEK
MEKINRLIREFWRQIYRGNDIDYIQIQTDEMKTEAADKKRSYNYRVIQSKNNSEIDMRGR
CSAGQRVLASLIIRMALAETFSSNCGVLALDEPTTNLDRNNILSLCEALNRIVEERQSQS
NFMLIIITHDEEFISTLGRIEHYHRVTRNEDGKSVIRKFRPN
NT seq
3909 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacaattgagaaattgtcaatccgcggcattcgaagtttcggtgcgaaagctgaa
gatgaacagatcataacttttacctctcctcttactctgatacttggagagaacggatgc
gggaaaacgacaattattgaatgtcttaaatacgcacttacgggtgatacgccaccagga
agtgagaaggggaaaagctttgtccatgatcccaagattttcaatgcaacggaatgtttg
ggacaagttaaacttatggtcaaaacactacggggcgaaaagtatacagtgtgtcgatcg
atgaaatatagcttcaagcgtagtaagcctacttttgagactttggatggaaccatttgc
ttggacttccaaggccagaaagctgctattagcaagagatgtgccgatataaatgcagaa
atgtgtcattatatgggagtatcaaaagcaataataaacaatgttatattttgtcatcaa
gaagaatccagttggccccttgacgaagggaaaaaacttaaagagaaattcgatgctatc
tttggtacaacagagtacaataaagccatagagaaaatgataaaactgagaaaggtacaa
atggatgagttgaaaacaaaagaggccgatctaaaggttttagctcatgttaaggcaaca
acagatagcaaaaatttggagctgcaacaggcgcagaaaaaattggataacttgaaagaa
atgcgtaatcggctcgaggaggacatgaagccgatacaggatcgtctcacaaagatcttc
acaatcgagcgggaaattagtgaacttacagctaagaagatcgaatatgaaacaaggttg
aaaaattcgaaggagcaagcaaagaacctccagtcgaaaattaaaaatatatttgaaggg
aatttatctatgctggacgaagaaatacgttccttccgggaaaatatgaatgataaaaag
aatcaactacaaaatgttgaggaaaaattgcaggccattaagtttgaggagaaaaaatta
caaaatgcgttcacggatctcgaccgtcgtcggacgtcattgattcaccagagacgacaa
gaacaggactatctttctgaaagagcccagaagattattgagttgtgtaagcttttgaaa
atagatgtagatgatgatatcgaagaaagacccaacgatgtacaggaagctctgaagaaa
attgaaactgcctttgtaaaagaggaaaaacggatatccgaaatgagtgccagaaatgat
aaagttgatcaagaacttcagcaggaaatagacaaactacgtgagaacaaagcttcaatt
gagagtgatatcgtgtcgaaaaaagatcaaaaaaaacaattagaccgggatcgacagaaa
aatctgaatgaaatcaatcaaatagagaaatctgcccaaatgttacaaacgttaacacgt
gaaattgaaaagatttctaaaacttatgacgattacagtgcgtcagtcgatttggaggga
atcaagaaaattatcgccgaaaaaaaggcaaatgtcaataaattccaagagacagtggaa
aaacttgatgagaaaatcacgttccttaattccatctcaaaacaaacaggtgaaatttca
ctgaaagaaaaggaactagagaaacgtgaaaccgaaatgcgtcgtgtcaaaaacaaacat
tccgataatttgaaaaaactgtttccaagtcgtgaaatttcgtctaattataagcgcaat
gttcaaaatctttatgatagcttgcaaaagcaaatatctgatttaaataagagtattaac
ctcggtaagctgaaggaaaaggaactgcaaataaccaggaagaatcaaaaggatgaaata
acgaagtttgaaaaagaacttgaaaaatgtgaagatagaatatatgaaaagtgccattct
tcggactatgatgggttgctggctcgttcaaaagagaatattgacaaaatacagatggaa
tatggagctctcaaatcagcggaagctatgtacaagaagtatattcaaaagatcgaagat
gatccatgttgtcctctctgtcataaagacatgcaaccgaatgaggctgctgatttatca
gccgaactttcagacgaaattcgtcgattgccggagaacattcaacgtacagaggagcaa
ctgataaaggagcaaagaaaatatgaagaattgttgtctttgaagccagtcattgaaaaa
gtacaaacccttaaaactgacattccgaaatgtaaagataaattgaaaaccaccgaagag
aaattgagcgaaactacaaatgatgttgaatcgaaccagatgctaacagccgagcctcaa
gctcatatagagttagttaatgcgattctcggtgatatgagtttactagatgaggcgatc
aaagatgctgcacgattacaaagcgagttggagaaattaaaggcaaagttgccttcctat
gatacaaatctatcactggatgatttacaattggagaaaacaacggtgagtgcagaattg
aaagcagatcgttccaaagttgacgaacttcaggcacaatatgaacgagaaagtgataca
ttgaatcaattgcgcgagaaaaggaatagcctcaaggataagcaaataaaacttcaagaa
ggagtgcaagctctcactcagctcaaatctcgtcgagatgaaatcgctgcacaaattgga
aaaattgataaagaattatttgagttagaagaaaaactaaagccactaaaggccgagctc
agttcagcggttgataaaaagcaacgaacaaaggaaaccaatcgtaaaatgttaaatact
gaaactgctaaaattgaaagttggaagaaaatcgacggtgaaattaaaagatacactaaa
gagctgcaagttcttgcggaattgaatttagcacaagaaatcgaaaatttgaaaaatacc
ttaaagcggcatactgatgaacaggctgagaaggagaaagaaaaatcagacacaacgacg
gcgattgaaaatttaaaaaccgatatccgtaatcaagaactggttgaacgagatctcaaa
gataatcgcgaattgaaaacactccaagaaaaagttgagctacttcaaatacaatatgat
gacctcagaaaagatatgggcgagcgtgatttcaagaacgttgcacgcgaaaaagatgaa
ctaacaaaaaagcaggacaacattcgaataaagaaaggtgaaatactaggtcaaatggga
gaagtccaaaaccaagtgaataacctcacgaaagaattgaatcagccccaatataaaaac
tgtgttaaaaactatcgcaaaagctactatgaagtggaaatcctaaagaaagtcattcat
gatcttgccgaatatcgtttggcattggaacgcgccttaatgcaattccattcggagaaa
atggaaaaaatcaatcgattaattcgtgaattttggcgtcaaatttatcgcggtaacgat
attgattatattcaaattcaaacggatgaaatgaagacagaggcagcggacaagaaacga
agctacaactatcgcgtaattcaatcgaaaaataattcagaaattgatatgcgtggacga
tgttcggcaggacaacgtgtgctagcttcgcttattatacgaatggctcttgcggagact
tttagtagtaattgcggtgtacttgcccttgatgaaccaacgacgaatttggatcgtaat
aatattctttcattgtgcgaagcgttaaatcgaattgttgaggaacgacagtcacaatcc
aattttatgttgatcataattacacacgatgaggagtttatctcgactctgggcagaatt
gagcactatcatcgagtgacacgtaatgaagatgggaaatctgttatacgtaaattcaga
ccgaattaa
DBGET
integrated database retrieval system
