KEGG   Hermetia illucens (black soldier fly): 119658332
Entry
119658332         CDS       T08287                                 
Name
(RefSeq) 5'-3' exoribonuclease 2 homolog
  KO
K12619  5'-3' exoribonuclease 2 [EC:3.1.13.-]
Organism
his  Hermetia illucens (black soldier fly)
Pathway
his03008  Ribosome biogenesis in eukaryotes
his03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:his00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    119658332
  09123 Folding, sorting and degradation
   03018 RNA degradation
    119658332
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:his03021]
    119658332
   03019 Messenger RNA biogenesis [BR:his03019]
    119658332
   03009 Ribosome biogenesis [BR:his03009]
    119658332
   03016 Transfer RNA biogenesis [BR:his03016]
    119658332
Transcription machinery [BR:his03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     119658332
Messenger RNA biogenesis [BR:his03019]
 Eukaryotic type
  mRNA degradation factors
   5'-3' decay
    5' exonucleases
     119658332
Ribosome biogenesis [BR:his03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    119658332
Transfer RNA biogenesis [BR:his03016]
 Eukaryotic type
  tRNA degradation factors
   Rapid tRNA decay (RTD) pathway factors
    119658332
SSDB
Motif
Pfam: XRN_M XRN_N CLIP1_ZNF zf-CCHC_4
Other DBs
NCBI-GeneID: 119658332
NCBI-ProteinID: XP_037921599
LinkDB
Position
5:71739966..71782915
AA seq 959 aa
MGVPAFFRWLSRKYPSVIIECVENKQVDDTGANIYEDATLPNPNGIEFDNLYLDMNGIIH
PCTHPEDKPPPKNEDEMMIAIFDCIDRLFGIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR
AAKEAVEKRAEVKRIRDELLARGCILPPEKPKEEHFDSNCITPGTPFMERLSRCLHYYIH
DRMNSNPAWKGVKVILSDANVPGEGEHKIMDYIRKQRSQPDHDPNTQHVLCGADADLIML
GLATHEPNFTIIREEFLPNKPKPCDICGQFGHEMDKCQGLNAMDMNSNMKPDIAVGAEVK
FIFVRLSVLREYLKRTLAMPNLPFKYEFERALDDWVFMCFFVGNDFLPHLPSLEIRENAI
DRLVELYKKCVYKTGGWLTDSGETKLDRVQMILTDLGQVEDQIFKERQRREEQFKARENA
KRRRMANERPDFSNMHNSQFAPTPLGRGMLPNAVQNPRQEMARIRTMNMQQQAGMHTGSG
SGGQRNDGPHGRKRKANEMAGEEQPEEEEDYQKNDEVRLWEDGFKDRYYESKFDVGPENE
GFRYSVALQYVRGLCWVLKYYYQGCASWKWYFPYHYAPFASDFVNIAGLSTKFEKGTKPF
NPLEQLMGVFPAASSSHVPAPWAQLMSDPKSTIIDFYPEDFKIDLNGKKFAWQGVALLPF
VDEKRLFKALKPYYSKLTAEEVKRNKRGDSRLYVTPENPGFKFLKTQYNRKIDPNIEVPI
SIQGMQGVILLSDECAPMDGIVESPINGQHDIHENQVLTVRFRDPSYGDDYIFPARRLPG
AIDPPVVLAPEKRDRDNYRPAIGFNRDLPQASLGDAGHRMLNHHSGNNQQREYSSNNFND
NRNQYSDRNQYSDRNRFQQQNNNRGNNNFGNNNFSNNRNNGGGYGGNNQGRNYGGNNNFG
GNNNNPNNQRNNSGGNWRSMPGGFNNQRQGFQNQNRGNNQQFGSRGGNRGGNRGGGHWR
NT seq 2880 nt   +upstreamnt  +downstreamnt
atgggagtaccagcattcttcaggtggctgagcagaaaatatccgagtgtaatcatcgaa
tgcgtcgaaaataagcaagttgatgacactggggcaaacatttacgaagacgcgacactg
cctaacccgaatggcattgagttcgataatttgtatctggacatgaacgggatcatccat
ccttgtacgcatccagaagataagccgccccccaaaaatgaggacgagatgatgatagcg
attttcgattgcatcgatcgtcttttcgggatcgtgcgtccccggaagcttttatacatg
gcgattgacggtgtggcgccgcgcgctaaaatgaaccaacagcggtcccgccgtttccgt
gcggccaaagaagcagtggagaaacgcgcagaagttaagcgaatccgagacgagcttcta
gctagaggttgtatcctgcctccagaaaaaccaaaagaggagcatttcgactctaattgt
attactccggggacgccgttcatggagcgattaagtcgctgccttcattactacatccac
gaccgcatgaacagcaatcctgcctggaagggcgtcaaagttatcctgtccgatgctaac
gttccaggcgagggagagcacaaaatcatggattatattcgcaagcaacgatcgcagccc
gatcacgatcccaatacacaacatgtgctatgtggagccgatgcggatttgattatgttg
ggactggctacgcacgaaccgaatttcaccatcattcgggaggaattcttgccgaataag
ccgaagccatgcgatatttgtggtcaatttggtcatgaaatggacaagtgccaagggctg
aacgcgatggatatgaactcaaacatgaaacctgacattgctgtaggcgcagaagtgaaa
ttcattttcgtgagactgagcgtgttaagagagtatttgaaaagaactttggccatgcca
aatttacctttcaaatatgaattcgagcgggcactggacgactgggtgtttatgtgtttc
tttgtaggaaacgatttccttccgcatttgcctagtttagaaattcgcgaaaacgcaata
gaccggctggtggagctatacaagaaatgtgtatacaagacagggggctggctgacagat
tccggggaaacaaaactggatcgtgtccaaatgattctgaccgacttgggtcaggttgaa
gatcagatttttaaagagcgacaacgccgcgaggaacaattcaaggctcgtgaaaacgcc
aaacgtcgtcgtatggctaatgaacgaccagatttctcgaatatgcacaattcacaattt
gccccgacaccgctcgggagaggaatgctcccgaacgccgttcagaatccacgacaggaa
atggcacggattcgaacaatgaacatgcaacagcaggccggcatgcatacaggatcgggt
tcaggaggccaaaggaatgatgggccccatggacgcaagcgtaaagcaaatgaaatggcc
ggcgaagagcagcctgaagaagaagaagactatcagaaaaatgatgaagttcgtctctgg
gaagacggtttcaaggatcggtattacgagtccaaattcgatgtgggacctgagaacgag
ggatttcggtactcagtggccttgcagtatgtgcgcggactctgctgggtactgaagtat
tattatcaaggctgtgcttcttggaagtggtactttccatatcattatgccccgttcgct
tcggactttgtgaatatcgctggattatccactaagtttgagaaaggaacaaagccgttc
aatccattggagcaattgatgggcgtgtttccggctgcaagtagctcccatgtacctgca
ccttgggcgcaacttatgtctgatccgaaatccacgattattgatttctatccagaagat
ttcaaaattgatctgaatggcaaaaaattcgcttggcagggagttgctctgttgccgttt
gttgatgaaaaacgtctcttcaaagctttgaaaccatattattcgaagttaacagcagaa
gaagtaaaacgtaataaacgtggagatagccggctatatgttaccccagaaaatccaggc
tttaaattccttaagacacagtacaatcgtaagattgacccgaacattgaagttcccata
tccattcaaggaatgcaaggtgtcattctattatcggacgaatgtgcaccaatggacgga
attgtcgagtcaccaatcaatgggcaacacgatattcacgaaaatcaagttctgacagtc
cgtttcagggatccctcttatggagatgattatattttcccagcaagaagacttccggga
gctatcgatccgccagttgtattggcaccggaaaaaagagacagggacaactaccgccca
gccattggatttaatcgcgacctgccacaagcatcacttggcgatgctggtcacagaatg
ctcaaccaccattctggtaacaatcagcagcgggaatattcctcgaataatttcaatgat
aatcgcaaccaatattctgatcgaaaccaatattctgatcgcaacagatttcaacagcag
aacaataatcgaggcaacaacaatttcggcaacaataatttctcgaacaacagaaataat
ggtggcggctatggtggtaataatcagggcagaaactatggtggtaataataactttggt
ggaaacaataacaacccgaacaatcagagaaataattcagggggtaattggcgttcaatg
cctggcggatttaataatcaacgtcaaggattccagaaccaaaatcgtggaaataatcaa
caatttggatcgagaggtgggaacaggggtgggaataggggcggcggacattggcgttaa

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