Hermetia illucens (black soldier fly): 119658332
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Entry
119658332 CDS
T08287
Name
(RefSeq) 5'-3' exoribonuclease 2 homolog
KO
K12619
5'-3' exoribonuclease 2 [EC:3.1.13.-]
Organism
his
Hermetia illucens (black soldier fly)
Pathway
his03008
Ribosome biogenesis in eukaryotes
his03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
his00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
119658332
09123 Folding, sorting and degradation
03018 RNA degradation
119658332
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
his03021
]
119658332
03019 Messenger RNA biogenesis [BR:
his03019
]
119658332
03009 Ribosome biogenesis [BR:
his03009
]
119658332
03016 Transfer RNA biogenesis [BR:
his03016
]
119658332
Transcription machinery [BR:
his03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
119658332
Messenger RNA biogenesis [BR:
his03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
119658332
Ribosome biogenesis [BR:
his03009
]
Eukaryotic type
Pre-60S particles
RNases
119658332
Transfer RNA biogenesis [BR:
his03016
]
Eukaryotic type
tRNA degradation factors
Rapid tRNA decay (RTD) pathway factors
119658332
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XRN_M
XRN_N
CLIP1_ZNF
zf-CCHC_4
Motif
Other DBs
NCBI-GeneID:
119658332
NCBI-ProteinID:
XP_037921599
LinkDB
All DBs
Position
5:71739966..71782915
Genome browser
AA seq
959 aa
AA seq
DB search
MGVPAFFRWLSRKYPSVIIECVENKQVDDTGANIYEDATLPNPNGIEFDNLYLDMNGIIH
PCTHPEDKPPPKNEDEMMIAIFDCIDRLFGIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR
AAKEAVEKRAEVKRIRDELLARGCILPPEKPKEEHFDSNCITPGTPFMERLSRCLHYYIH
DRMNSNPAWKGVKVILSDANVPGEGEHKIMDYIRKQRSQPDHDPNTQHVLCGADADLIML
GLATHEPNFTIIREEFLPNKPKPCDICGQFGHEMDKCQGLNAMDMNSNMKPDIAVGAEVK
FIFVRLSVLREYLKRTLAMPNLPFKYEFERALDDWVFMCFFVGNDFLPHLPSLEIRENAI
DRLVELYKKCVYKTGGWLTDSGETKLDRVQMILTDLGQVEDQIFKERQRREEQFKARENA
KRRRMANERPDFSNMHNSQFAPTPLGRGMLPNAVQNPRQEMARIRTMNMQQQAGMHTGSG
SGGQRNDGPHGRKRKANEMAGEEQPEEEEDYQKNDEVRLWEDGFKDRYYESKFDVGPENE
GFRYSVALQYVRGLCWVLKYYYQGCASWKWYFPYHYAPFASDFVNIAGLSTKFEKGTKPF
NPLEQLMGVFPAASSSHVPAPWAQLMSDPKSTIIDFYPEDFKIDLNGKKFAWQGVALLPF
VDEKRLFKALKPYYSKLTAEEVKRNKRGDSRLYVTPENPGFKFLKTQYNRKIDPNIEVPI
SIQGMQGVILLSDECAPMDGIVESPINGQHDIHENQVLTVRFRDPSYGDDYIFPARRLPG
AIDPPVVLAPEKRDRDNYRPAIGFNRDLPQASLGDAGHRMLNHHSGNNQQREYSSNNFND
NRNQYSDRNQYSDRNRFQQQNNNRGNNNFGNNNFSNNRNNGGGYGGNNQGRNYGGNNNFG
GNNNNPNNQRNNSGGNWRSMPGGFNNQRQGFQNQNRGNNQQFGSRGGNRGGNRGGGHWR
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atgggagtaccagcattcttcaggtggctgagcagaaaatatccgagtgtaatcatcgaa
tgcgtcgaaaataagcaagttgatgacactggggcaaacatttacgaagacgcgacactg
cctaacccgaatggcattgagttcgataatttgtatctggacatgaacgggatcatccat
ccttgtacgcatccagaagataagccgccccccaaaaatgaggacgagatgatgatagcg
attttcgattgcatcgatcgtcttttcgggatcgtgcgtccccggaagcttttatacatg
gcgattgacggtgtggcgccgcgcgctaaaatgaaccaacagcggtcccgccgtttccgt
gcggccaaagaagcagtggagaaacgcgcagaagttaagcgaatccgagacgagcttcta
gctagaggttgtatcctgcctccagaaaaaccaaaagaggagcatttcgactctaattgt
attactccggggacgccgttcatggagcgattaagtcgctgccttcattactacatccac
gaccgcatgaacagcaatcctgcctggaagggcgtcaaagttatcctgtccgatgctaac
gttccaggcgagggagagcacaaaatcatggattatattcgcaagcaacgatcgcagccc
gatcacgatcccaatacacaacatgtgctatgtggagccgatgcggatttgattatgttg
ggactggctacgcacgaaccgaatttcaccatcattcgggaggaattcttgccgaataag
ccgaagccatgcgatatttgtggtcaatttggtcatgaaatggacaagtgccaagggctg
aacgcgatggatatgaactcaaacatgaaacctgacattgctgtaggcgcagaagtgaaa
ttcattttcgtgagactgagcgtgttaagagagtatttgaaaagaactttggccatgcca
aatttacctttcaaatatgaattcgagcgggcactggacgactgggtgtttatgtgtttc
tttgtaggaaacgatttccttccgcatttgcctagtttagaaattcgcgaaaacgcaata
gaccggctggtggagctatacaagaaatgtgtatacaagacagggggctggctgacagat
tccggggaaacaaaactggatcgtgtccaaatgattctgaccgacttgggtcaggttgaa
gatcagatttttaaagagcgacaacgccgcgaggaacaattcaaggctcgtgaaaacgcc
aaacgtcgtcgtatggctaatgaacgaccagatttctcgaatatgcacaattcacaattt
gccccgacaccgctcgggagaggaatgctcccgaacgccgttcagaatccacgacaggaa
atggcacggattcgaacaatgaacatgcaacagcaggccggcatgcatacaggatcgggt
tcaggaggccaaaggaatgatgggccccatggacgcaagcgtaaagcaaatgaaatggcc
ggcgaagagcagcctgaagaagaagaagactatcagaaaaatgatgaagttcgtctctgg
gaagacggtttcaaggatcggtattacgagtccaaattcgatgtgggacctgagaacgag
ggatttcggtactcagtggccttgcagtatgtgcgcggactctgctgggtactgaagtat
tattatcaaggctgtgcttcttggaagtggtactttccatatcattatgccccgttcgct
tcggactttgtgaatatcgctggattatccactaagtttgagaaaggaacaaagccgttc
aatccattggagcaattgatgggcgtgtttccggctgcaagtagctcccatgtacctgca
ccttgggcgcaacttatgtctgatccgaaatccacgattattgatttctatccagaagat
ttcaaaattgatctgaatggcaaaaaattcgcttggcagggagttgctctgttgccgttt
gttgatgaaaaacgtctcttcaaagctttgaaaccatattattcgaagttaacagcagaa
gaagtaaaacgtaataaacgtggagatagccggctatatgttaccccagaaaatccaggc
tttaaattccttaagacacagtacaatcgtaagattgacccgaacattgaagttcccata
tccattcaaggaatgcaaggtgtcattctattatcggacgaatgtgcaccaatggacgga
attgtcgagtcaccaatcaatgggcaacacgatattcacgaaaatcaagttctgacagtc
cgtttcagggatccctcttatggagatgattatattttcccagcaagaagacttccggga
gctatcgatccgccagttgtattggcaccggaaaaaagagacagggacaactaccgccca
gccattggatttaatcgcgacctgccacaagcatcacttggcgatgctggtcacagaatg
ctcaaccaccattctggtaacaatcagcagcgggaatattcctcgaataatttcaatgat
aatcgcaaccaatattctgatcgaaaccaatattctgatcgcaacagatttcaacagcag
aacaataatcgaggcaacaacaatttcggcaacaataatttctcgaacaacagaaataat
ggtggcggctatggtggtaataatcagggcagaaactatggtggtaataataactttggt
ggaaacaataacaacccgaacaatcagagaaataattcagggggtaattggcgttcaatg
cctggcggatttaataatcaacgtcaaggattccagaaccaaaatcgtggaaataatcaa
caatttggatcgagaggtgggaacaggggtgggaataggggcggcggacattggcgttaa
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