Hermetia illucens (black soldier fly): 119659080
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Entry
119659080 CDS
T08287
Name
(RefSeq) exosome complex component RRP42
KO
K12589
exosome complex component RRP42
Organism
his
Hermetia illucens (black soldier fly)
Pathway
his03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
his00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119659080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
his03019
]
119659080
Messenger RNA biogenesis [BR:
his03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
119659080
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
119659080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
119659080
NCBI-ProteinID:
XP_037922923
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All DBs
Position
1:complement(33194593..33203090)
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AA seq
297 aa
AA seq
DB search
MANILLSDAEKTFILHGVEEDFRCDGRTRRDYRPMELETGIVSHASGSARLRLANTDILV
GIKTEIDVPSPYNIDKGKIEFFIDCSANATPEFEGRGGEELAQEISDTLAKSYQSGQAFD
LRKLCILPGQQCWKLYVDILILECGGNLFDAVSLAVKAALFNTKIPRVTAALMDGGNVDL
SLSDDPYDCNRIEINQIPILVTVCKIGDSCVVDPSAEEEQCSAASVVVGVSQRDNKSFLT
NIHMCGVGSFHQETLESSVELGLSAAEKLDEELLIALKLEEERFGKYGKKEIFGFLR
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatatccttttaagtgatgcagagaagacattcattttacatggtgttgaggaa
gacttccggtgtgatggaagaacaaggcgagattaccgtccaatggaattggaaacggga
atcgtaagccatgcaagtggctcagctcgactgcgactagccaacacagacatattagtc
ggtatcaaaacagaaatagatgttccaagcccctataatatagacaaaggaaaaatagag
tttttcatcgactgttctgccaatgctacccctgaatttgaaggtcgaggtggtgaagaa
ctggcgcaagaaatttctgatacactggctaaatcctatcaatcaggacaagcattcgat
ttaagaaaactctgtatacttcccgggcaacaatgctggaaattatacgttgatattctg
attctcgaatgtggtggaaacttgttcgatgcagtatcgctagctgttaaggccgctcta
ttcaacacgaaaattccccgcgtaacggctgctttaatggatggcggaaatgtcgatttg
tccttgtcagatgatccatacgattgtaatcgtattgaaatcaatcaaattccgattcta
gtgactgtatgcaaaattggtgattcatgcgtagtcgatccatcagctgaagaggaacaa
tgcagtgcggcaagtgttgttgtgggcgtatcgcaacgtgataacaaaagttttctcacc
aatattcacatgtgtggcgtggggtcattccatcaggaaaccctagaaagtagtgtggag
cttggcctatctgcagctgaaaaattagatgaagaacttttaatagctctcaaactggaa
gaagaacgattcggaaaatatggaaagaaagaaatatttggttttctaagataa
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