Hermetia illucens (black soldier fly): 119659256
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Entry
119659256 CDS
T08287
Name
(RefSeq) protein PAT1 homolog 1 isoform X1
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
his
Hermetia illucens (black soldier fly)
Pathway
his03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
his00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119659256
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
his03019
]
119659256
Messenger RNA biogenesis [BR:
his03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
119659256
mRNA degradation factors
5'-3' decay
Decapping complex
119659256
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
119659256
NCBI-ProteinID:
XP_037923175
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Position
6:2145078..2200417
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AA seq
828 aa
AA seq
DB search
MEDSFFGFDTSAPVEDDGGGGRRDGEEEEEYDALNDETFGAAINGDWENIHETLVKLDGH
NGSDSKDEDEGSDLEINLSGVKLDDVDIGSDDNESRIQLDPRVWATPYKPEVQQNISNNG
YPNPEAFLRRHLRHPFDSMQQHQQQQHQAMQTQQQQHQNRMFGLPPAPNIPPKICTVEDI
ERNIRNQQMRTGTPKPTTPLPNMQPPISAPNVSGFNRPSAPPGFSAPRMNFNAPPHPMNM
HQGNQAGHRGPPGFPQMPMMSAPHGLPGPPHPNFPRNMSHNLPIALNNFAMHPNFNAMRP
MGPPMISPRLPMQPNMMQGMPATNAVNQFNQRLVQEIQQNHPMLGNNRGMNHGYNNSNYP
HNPYMQGYQHQQKNHGKVNMRSNGNVEEFDEYSNLMSARDKHWLIGIQLSQLNTETPYID
DYYYTVLKERRAKLRGDSQSKAHKDNQLNHPLIQPKGHAQLVLISMGKNGANIRNGQNRE
RKNSETKADKEPIIRTHTPLQFENSLGKLQYGSVTAPRKIIDMDVMGSDSSPQFNTSIEL
SAQRKSRQLLLHIETVYRIILKLEDLENPAAIATFAVVRERKEKEKQQALELAMIEAANR
AGKDSDKADSAGNSVNSSISDKNSYEIESRDKLLQKLLPLISTEKVALMMNVRKGKALIR
RIMPFIEDNPVRWNVWCGVFMSLQNVLKKDKDDGDGLLFALYPHFKKQIVEADLSDVIKI
ANSMPLNDKRVNVLFACKFCISSLFALLLRAEQIYATTSDPDIASNKEWPQFLSTLSASL
SRTVQHQTISAAIESDAIQPMVHHFSRFETLKLESLLALFSQAKQQVN
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atggaagactcgttttttggatttgatacatcagcaccggtggaggatgacggaggaggt
ggacgtagggatggtgaagaggaggaagaatacgatgccctaaatgacgaaacatttgga
gctgccatcaacggtgactgggaaaatattcacgaaacgttggtgaagctcgacgggcat
aatggttcagacagtaaggacgaagatgaggggtcagacttagaaattaatctatcagga
gttaagcttgacgatgtggacattggatcggacgacaatgagagtagaatacaattggac
cccagggtgtgggcaacaccttataaaccagaagtacaacagaatatatccaacaatgga
tatccaaacccggaagcctttttacgacgacatcttcgtcatccatttgacagcatgcag
cagcatcaacaacagcaacaccaagcaatgcaaacgcaacagcaacaacatcaaaataga
atgtttggactgccaccagcgcccaatataccgcctaaaatatgcacagtggaagatatc
gagaggaatattcgcaatcaacaaatgcgaactggcactcctaagcccacaacaccatta
cccaatatgcaaccaccaatctccgccccaaatgtgagtggtttcaatcgaccatcagca
ccgccaggattcagtgcaccccgaatgaatttcaatgctccaccacatcccatgaatatg
catcaaggcaatcaggcagggcatcgcggaccacctggtttcccacaaatgccgatgatg
tcagcacctcatggtcttcccggtccacctcatcccaatttcccacgcaatatgtcacac
aatttgccaattgcccttaataactttgcgatgcatcctaatttcaatgccatgcggcct
atgggacctccaatgatctcgcccagattacctatgcaaccaaatatgatgcagggcatg
cccgccaccaatgccgtgaatcagttcaatcaacggctggtacaggaaattcagcagaac
catccgatgctgggcaacaatcgcggcatgaatcatggatataacaattcaaattatcca
cacaacccctacatgcaaggttatcagcatcagcagaagaatcatggaaaggtgaatatg
cgatcgaacggaaatgtcgaagaatttgacgaatattcaaacttaatgagcgcccgggat
aaacactggctgataggaatccaattgtcacaactgaataccgagaccccgtacatagac
gattattactataccgtgctgaaagagagacgagccaaactgcggggtgacagtcaaagc
aaagcgcataaagataaccaactgaatcatccattgatccagccgaaaggacatgcgcaa
cttgtcctaatatcgatgggcaagaacggcgcaaacattcgcaacggacagaatcgagaa
cggaaaaattccgagacgaaagcagacaaggagccaattattcgaacgcatacaccgttg
caatttgaaaattctctgggtaaacttcaatatggaagcgtgacggcaccccggaaaatt
attgatatggacgtgatgggtagtgatagtagtccgcaatttaacacgtctattgaactg
tcggcacaacgaaaatctcgacaattgttgttgcatattgaaactgtttataggattata
ttgaaacttgaggatttggaaaatccggcagcgattgcgacgtttgcggtggttagggaa
cgtaaagaaaaggagaagcaacaagctctggagttggccatgatagaagccgcgaacaga
gcaggaaaggattctgacaaagcagattcggcaggaaattcagtgaattcatcgattagt
gataagaacagctacgaaattgaatcacgtgataaactgttacagaaactattaccactc
atttcaactgagaaagtcgctttgatgatgaacgtacgaaaaggcaaggccttgattcgt
cgcattatgcctttcattgaggacaatcctgttcgatggaatgtttggtgtggtgttttc
atgtcactccagaatgtactgaagaaagacaaggatgatggcgatggtttgttgtttgca
ctttatccgcactttaaaaagcaaatcgtggaagcagatcttagtgatgtcataaagatt
gctaattcgatgccattgaacgacaagagggttaatgttctattcgcttgcaaattctgt
atatcatcattattcgcacttctactgcgggctgaacaaatttacgccacaacgtctgat
ccagacatagcttccaataaagaatggccacaattcttgtctacattgtcagcatctctg
agccgaactgtgcaacatcaaaccattagtgctgccatcgaaagtgatgcaattcagcca
atggttcatcatttctcacgtttcgaaacgctcaagctggaatcactgttggcattgttc
tctcaagctaaacaacaagtgaactaa
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