Haemophilus influenzae 86-028NP (nontypeable): NTHI0076
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Entry
NTHI0076 CDS
T00248
Symbol
pcnB
Name
(GenBank) probable poly polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
hit
Haemophilus influenzae 86-028NP (nontypeable)
Pathway
hit03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hit00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NTHI0076 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hit03019
]
NTHI0076 (pcnB)
Enzymes [BR:
hit01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
NTHI0076 (pcnB)
Messenger RNA biogenesis [BR:
hit03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
NTHI0076 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
DUF2204
Motif
Other DBs
NCBI-ProteinID:
AAX87066
UniProt:
Q4QPI1
LinkDB
All DBs
Position
67887..69245
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AA seq
452 aa
AA seq
DB search
MPKARAKKSEQTRRYDKNVIKAAQFDISPSDFSRNALNVVEKLQRQGFEAYIVGGCIRDL
LLGKKPKDFDVATNARPEQIQNIFQRQCRLVGRRFRLAHIMFGRDIIEVATFRANHSDAR
NENQAKQSNEGMLLRDNVYGTIEQDAARRDFTVNALYYNPQDNTLRDYFEGIKDLKAGKL
RLIGDPVTRYQEDPVRMLRSIRFMAKLDMFLEKPSEQPIRELAPLLKNIPPARLFDESLK
LLQAGQGVKTYRLLRQYSLFEQLFPALSAYFTEKEDSFAERMIVTALSSTDERVADKLRI
NPAFLFAAFFWYPLREKVEILKNEGGLNNHDAYALAGNEVLDLFCRALAAPRRHTAVIRD
IWFLQLQLLKRTGSAPMRTMEHPKFRAGFDLLAMRAEIEGGETIELAKWWHEYQFSNGEQ
REQLIHEQQRLHPKPKKKYYRPRRRKITRSAE
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaagcgcgagcaaaaaaatcggaacaaacacgtcgctatgataaaaatgtgatt
aaagcggctcaatttgatatttctccgagtgattttagccgtaatgctctcaatgtagtg
gaaaaactgcaacgtcaaggtttcgaggcttatatcgtcggtggatgtatccgtgattta
ttgctcggtaaaaaaccaaaagattttgatgttgcaacaaatgctcgcccagagcaaatc
caaaacatttttcaacgccaatgtcgtttagtgggtcgccgtttccgcttagcacatatt
atgtttggtcgagatattattgaagtcgccactttccgtgctaatcacagtgatgctcgc
aatgaaaatcaagcgaaacagagcaatgaaggcatgttactgcgcgataatgtttacggt
acgatcgaacaagatgcagcacgccgtgattttacggtcaatgcactgtattacaatccg
caagataatacgttacgagattatttcgagggcattaaggatctcaaagcaggcaagcta
cgcttaattggcgatcctgttacacgttatcaagaagatcctgtgcgcatgctacgctca
attcgttttatggcaaaacttgatatgttccttgaaaaaccaagtgaacagccaattcgt
gaacttgcacctttattaaaaaatattccaccagctcgcttatttgacgaaagtttaaaa
ttattgcaggcaggacaaggggtaaaaacctatcggttattacgccaatatagtttattt
gaacaacttttccctgcattaagcgcatattttacagagaaagaagatagctttgcagaa
cgtatgatcgttaccgcccttagttcgacagatgaacgtgttgcggataaacttcgtatt
aatcctgcattcttatttgcagcatttttctggtatccattgcgcgaaaaagtggaaatt
ttaaaaaatgaaggtggtttaaataatcatgatgcttatgctttagcaggcaatgaagtt
ttagacttattctgccgtgctttggctgcaccacgtcgtcatactgcggtcattcgtgac
atttggttcttacaattgcaattattaaaacgtactggctcagcaccaatgcgtaccatg
gaacatccaaaattccgtgctggctttgatttactggctatgcgtgcagaaattgaaggt
ggcgaaaccattgaattagccaaatggtggcacgaatatcaatttagtaatggtgaacag
cgcgaacagttgatacacgagcaacaacgcttacatcctaaaccaaagaaaaaatactac
cgtccacgccgtcgtaaaataacacgttcagcagagtaa
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