Haemophilus influenzae 86-028NP (nontypeable): NTHI0405
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Entry
NTHI0405 CDS
T00248
Symbol
rho
Name
(GenBank) transcription termination factor rho
KO
K03628
transcription termination factor Rho
Organism
hit
Haemophilus influenzae 86-028NP (nontypeable)
Pathway
hit03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hit00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NTHI0405 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hit03021
]
NTHI0405 (rho)
03019 Messenger RNA biogenesis [BR:
hit03019
]
NTHI0405 (rho)
Transcription machinery [BR:
hit03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
NTHI0405 (rho)
Messenger RNA biogenesis [BR:
hit03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
NTHI0405 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
S1CSD-TOTE-2
NACHT
AAA_22
AAA_25
AAA
Motif
Other DBs
NCBI-ProteinID:
AAX87349
UniProt:
Q4QNP8
LinkDB
All DBs
Position
391802..393064
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AA seq
420 aa
AA seq
DB search
MHLTELKNTPVSDLVKLGEEQMGLENLARLRKQDIVFAILKQHAKSGEDIFGGGVLEILP
DGFGFLRSADSSYLAGPDDIYVSPSQIRRFNLQTGDKIEGKIRPPKEGERYFALLKVDQV
NDDKPEVSRSKILFENLTPLHANSRLRMERGNGSTEDLTARILDLASPIGKGQRGLIVAP
PKAGKTMLLQNIAQSITHNYPDVELIVLLIDERPEEVTEMQRSVKGEVIASTFDEPATRH
VQVAEMVIEKAKRSVEHKKDVVILLDSITRLARAYNTVTPASGKILSGGVDANALHRPKR
FFGAARNVEEGGSLTIIATALVDTGSKMDEVIFEEFKGTGNMELHLSRKIAERRVFPAID
FKRSGTRKEDLLTTADELQKMWILRKILNPMDEVDAMEFLIDKLMMAKTNEEFFEVMKRS
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgcatttaacagaacttaaaaatacgcctgtttctgatcttgtgaaactcggcgaggag
cagatgggcttagaaaatttagcgcgtttgcgtaaacaagatattgtctttgcaatctta
aaacagcacgccaaaagtggcgaagatattttcggcggtggcgtgctagaaattttacca
gatggttttggtttccttcgttctgccgacagttcctaccttgcaggccctgatgatatt
tatgtttccccaagtcaaatccgtcgttttaatcttcaaactggggataaaatcgaaggc
aaaattcgtccaccaaaagaaggcgaacgttattttgcacttttaaaagttgatcaagtt
aatgacgacaaaccagaagtttctcgtagcaaaatcttatttgaaaacttaacaccatta
catgctaactctcgtttaagaatggagcgaggcaatggatcaacagaagatttaaccgcc
cgtattttagatttagcctcgccaattggtaaaggccaacgtgggttaatcgtagcacca
ccaaaagcgggtaaaacaatgttgttgcaaaatattgcgcaaagtatcacgcataattac
cccgatgtggaacttatcgtattattgattgatgaacgcccagaagaagtgacagaaatg
caacgttccgtaaaaggcgaagtcattgcgtctacttttgatgaacccgcaactcgtcac
gttcaagtggcagaaatggtaatcgaaaaagcgaaacgttctgtagaacataaaaaagat
gtggtcattttgcttgattctattactcgtttagcgcgcgcttacaatacagtcactcca
gcttcaggtaaaattttgtctggtggtgtggatgctaatgcgttgcatcgtccaaaacgt
ttctttggagctgcacgtaatgtggaagaaggcggcagtttaacgattattgcaacagca
ctagttgatactggttcgaaaatggatgaagtaatttttgaggaatttaaaggtacgggt
aatatggaattgcacctttctcgtaaaattgcagaaagacgcgtattcccagccattgac
tttaaacgctctggtactcgtaaagaagacttactcacaacagcggacgaattacaaaaa
atgtggattcttcgtaagattcttaatccaatggatgaagtggatgcaatggaattcttg
attgataagctgatgatggcgaaaaccaacgaagagttttttgaagtgatgaaacgttcg
taa
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